Gene : Thecc1EG042540 T. cacao v1.1
Defline:  (1 of 1) KOG4031 - Vesicle coat protein clathrin, light chain Genomic Order:  197
Name:  ? Thecc1EG042540 Secondary Identifier:  ? PAC:27443334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042540 0.5kb upstream 0.5kb upstream 3387 true scaffold_10r: 1022240-1025626 Theobroma cacao
Thecc1EG042540 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1025127-1025626 Theobroma cacao
Thecc1EG042540 0.5kb downstream 0.5kb downstream 3387 true scaffold_10r: 1021740-1025126 Theobroma cacao
Thecc1EG042540 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1021740-1022239 Theobroma cacao
Thecc1EG042540 1.0kb upstream 1.0kb upstream 3887 true scaffold_10r: 1022240-1026126 Theobroma cacao
Thecc1EG042540 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1025127-1026126 Theobroma cacao
Thecc1EG042540 1.0kb downstream 1.0kb downstream 3887 true scaffold_10r: 1021240-1025126 Theobroma cacao
Thecc1EG042540 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1021240-1022239 Theobroma cacao
Thecc1EG042540 2.0kb upstream 2.0kb upstream 4887 true scaffold_10r: 1022240-1027126 Theobroma cacao
Thecc1EG042540 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1025127-1027126 Theobroma cacao
Thecc1EG042540 2.0kb downstream 2.0kb downstream 4887 true scaffold_10r: 1020240-1025126 Theobroma cacao
Thecc1EG042540 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1020240-1022239 Theobroma cacao
Thecc1EG042540 5.0kb upstream 5.0kb upstream 7887 true scaffold_10r: 1022240-1030126 Theobroma cacao
Thecc1EG042540 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1025127-1030126 Theobroma cacao
Thecc1EG042540 5.0kb downstream 5.0kb downstream 7887 true scaffold_10r: 1017240-1025126 Theobroma cacao
Thecc1EG042540 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1017240-1022239 Theobroma cacao
Thecc1EG042540 10.0kb upstream 10.0kb upstream 12887 true scaffold_10r: 1022240-1035126 Theobroma cacao
Thecc1EG042540 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1025127-1035126 Theobroma cacao
Thecc1EG042540 10.0kb downstream 10.0kb downstream 12887 true scaffold_10r: 1012240-1025126 Theobroma cacao
Thecc1EG042540 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1012240-1022239 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830985 5264 Brassicales-Malvales View MSA
124337630 5266 SBM View MSA
124247062 5268 Malvidae View MSA
124069515 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain