Gene : Thecc1EG042497 T. cacao v1.1
Defline:  (1 of 5) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Genomic Order:  155
Name:  ? Thecc1EG042497 Secondary Identifier:  ? PAC:27442423
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPASYN-PWY Theobroma cacao pathologic  
Tcacao PWY-6351 Theobroma cacao pathologic  
Tcacao PWY-6367 Theobroma cacao pathologic  
Tcacao PWY-7039 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042497 0.5kb upstream 0.5kb upstream 5420 true scaffold_10r: 838420-843839 Theobroma cacao
Thecc1EG042497 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 843340-843839 Theobroma cacao
Thecc1EG042497 0.5kb downstream 0.5kb downstream 5420 true scaffold_10r: 837920-843339 Theobroma cacao
Thecc1EG042497 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 837920-838419 Theobroma cacao
Thecc1EG042497 1.0kb upstream 1.0kb upstream 5920 true scaffold_10r: 838420-844339 Theobroma cacao
Thecc1EG042497 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 843340-844339 Theobroma cacao
Thecc1EG042497 1.0kb downstream 1.0kb downstream 5920 true scaffold_10r: 837420-843339 Theobroma cacao
Thecc1EG042497 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 837420-838419 Theobroma cacao
Thecc1EG042497 2.0kb upstream 2.0kb upstream 6920 true scaffold_10r: 838420-845339 Theobroma cacao
Thecc1EG042497 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 843340-845339 Theobroma cacao
Thecc1EG042497 2.0kb downstream 2.0kb downstream 6920 true scaffold_10r: 836420-843339 Theobroma cacao
Thecc1EG042497 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 836420-838419 Theobroma cacao
Thecc1EG042497 5.0kb upstream 5.0kb upstream 9920 true scaffold_10r: 838420-848339 Theobroma cacao
Thecc1EG042497 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 843340-848339 Theobroma cacao
Thecc1EG042497 5.0kb downstream 5.0kb downstream 9920 true scaffold_10r: 833420-843339 Theobroma cacao
Thecc1EG042497 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 833420-838419 Theobroma cacao
Thecc1EG042497 10.0kb upstream 10.0kb upstream 14920 true scaffold_10r: 838420-853339 Theobroma cacao
Thecc1EG042497 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 843340-853339 Theobroma cacao
Thecc1EG042497 10.0kb downstream 10.0kb downstream 14920 true scaffold_10r: 828420-843339 Theobroma cacao
Thecc1EG042497 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 828420-838419 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827505 5264 Brassicales-Malvales View MSA
124337245 5266 SBM View MSA
124244278 5268 Malvidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain