Gene : Thecc1EG042799 T. cacao v1.1
Defline:  (1 of 8) PTHR11945//PTHR11945:SF183 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  425
Name:  ? Thecc1EG042799 Secondary Identifier:  ? PAC:27441340
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042799 0.5kb upstream 0.5kb upstream 1661 true scaffold_10r: 2315258-2316918 Theobroma cacao
Thecc1EG042799 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2315258-2315757 Theobroma cacao
Thecc1EG042799 0.5kb downstream 0.5kb downstream 1661 true scaffold_10r: 2315758-2317418 Theobroma cacao
Thecc1EG042799 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2316919-2317418 Theobroma cacao
Thecc1EG042799 1.0kb upstream 1.0kb upstream 2161 true scaffold_10r: 2314758-2316918 Theobroma cacao
Thecc1EG042799 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2314758-2315757 Theobroma cacao
Thecc1EG042799 1.0kb downstream 1.0kb downstream 2161 true scaffold_10r: 2315758-2317918 Theobroma cacao
Thecc1EG042799 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2316919-2317918 Theobroma cacao
Thecc1EG042799 2.0kb upstream 2.0kb upstream 3161 true scaffold_10r: 2313758-2316918 Theobroma cacao
Thecc1EG042799 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2313758-2315757 Theobroma cacao
Thecc1EG042799 2.0kb downstream 2.0kb downstream 3161 true scaffold_10r: 2315758-2318918 Theobroma cacao
Thecc1EG042799 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2316919-2318918 Theobroma cacao
Thecc1EG042799 5.0kb upstream 5.0kb upstream 6161 true scaffold_10r: 2310758-2316918 Theobroma cacao
Thecc1EG042799 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2310758-2315757 Theobroma cacao
Thecc1EG042799 5.0kb downstream 5.0kb downstream 6161 true scaffold_10r: 2315758-2321918 Theobroma cacao
Thecc1EG042799 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2316919-2321918 Theobroma cacao
Thecc1EG042799 10.0kb upstream 10.0kb upstream 11161 true scaffold_10r: 2305758-2316918 Theobroma cacao
Thecc1EG042799 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2305758-2315757 Theobroma cacao
Thecc1EG042799 10.0kb downstream 10.0kb downstream 11161 true scaffold_10r: 2315758-2326918 Theobroma cacao
Thecc1EG042799 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2316919-2326918 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain