Gene : Thecc1EG042734 T. cacao v1.1
Defline:  C2H2 and C2HC zinc fingers superfamily protein Genomic Order:  368
Name:  ? Thecc1EG042734 Secondary Identifier:  ? PAC:27442392
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042734 0.5kb upstream 0.5kb upstream 1769 true scaffold_10r: 2032111-2033879 Theobroma cacao
Thecc1EG042734 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2032111-2032610 Theobroma cacao
Thecc1EG042734 0.5kb downstream 0.5kb downstream 1769 true scaffold_10r: 2032611-2034379 Theobroma cacao
Thecc1EG042734 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2033880-2034379 Theobroma cacao
Thecc1EG042734 1.0kb upstream 1.0kb upstream 2269 true scaffold_10r: 2031611-2033879 Theobroma cacao
Thecc1EG042734 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2031611-2032610 Theobroma cacao
Thecc1EG042734 1.0kb downstream 1.0kb downstream 2269 true scaffold_10r: 2032611-2034879 Theobroma cacao
Thecc1EG042734 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2033880-2034879 Theobroma cacao
Thecc1EG042734 2.0kb upstream 2.0kb upstream 3269 true scaffold_10r: 2030611-2033879 Theobroma cacao
Thecc1EG042734 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2030611-2032610 Theobroma cacao
Thecc1EG042734 2.0kb downstream 2.0kb downstream 3269 true scaffold_10r: 2032611-2035879 Theobroma cacao
Thecc1EG042734 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2033880-2035879 Theobroma cacao
Thecc1EG042734 5.0kb upstream 5.0kb upstream 6269 true scaffold_10r: 2027611-2033879 Theobroma cacao
Thecc1EG042734 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2027611-2032610 Theobroma cacao
Thecc1EG042734 5.0kb downstream 5.0kb downstream 6269 true scaffold_10r: 2032611-2038879 Theobroma cacao
Thecc1EG042734 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2033880-2038879 Theobroma cacao
Thecc1EG042734 10.0kb upstream 10.0kb upstream 11269 true scaffold_10r: 2022611-2033879 Theobroma cacao
Thecc1EG042734 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2022611-2032610 Theobroma cacao
Thecc1EG042734 10.0kb downstream 10.0kb downstream 11269 true scaffold_10r: 2032611-2043879 Theobroma cacao
Thecc1EG042734 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2033880-2043879 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816455 5264 Brassicales-Malvales Singleton cluster - no MSA
124312852 5266 SBM Singleton cluster - no MSA
124249078 5268 Malvidae View MSA
124072849 5270 Rosid View MSA
123747736 5271 Pentapetalae View MSA
122788735 5272 Eudicot View MSA
122049526 5273 Angiosperm View MSA
121348741 5274 Embryophyte View MSA
123380998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain