Gene : Thecc1EG042727 T. cacao v1.1
Defline:  (1 of 2) PTHR32166//PTHR32166:SF27 - FAMILY NOT NAMED // HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  361
Name:  ? Thecc1EG042727 Secondary Identifier:  ? PAC:27442185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042727 0.5kb upstream 0.5kb upstream 4895 true scaffold_10r: 1985266-1990160 Theobroma cacao
Thecc1EG042727 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1985266-1985765 Theobroma cacao
Thecc1EG042727 0.5kb downstream 0.5kb downstream 4895 true scaffold_10r: 1985766-1990660 Theobroma cacao
Thecc1EG042727 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1990161-1990660 Theobroma cacao
Thecc1EG042727 1.0kb upstream 1.0kb upstream 5395 true scaffold_10r: 1984766-1990160 Theobroma cacao
Thecc1EG042727 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1984766-1985765 Theobroma cacao
Thecc1EG042727 1.0kb downstream 1.0kb downstream 5395 true scaffold_10r: 1985766-1991160 Theobroma cacao
Thecc1EG042727 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1990161-1991160 Theobroma cacao
Thecc1EG042727 2.0kb upstream 2.0kb upstream 6395 true scaffold_10r: 1983766-1990160 Theobroma cacao
Thecc1EG042727 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1983766-1985765 Theobroma cacao
Thecc1EG042727 2.0kb downstream 2.0kb downstream 6395 true scaffold_10r: 1985766-1992160 Theobroma cacao
Thecc1EG042727 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1990161-1992160 Theobroma cacao
Thecc1EG042727 5.0kb upstream 5.0kb upstream 9395 true scaffold_10r: 1980766-1990160 Theobroma cacao
Thecc1EG042727 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1980766-1985765 Theobroma cacao
Thecc1EG042727 5.0kb downstream 5.0kb downstream 9395 true scaffold_10r: 1985766-1995160 Theobroma cacao
Thecc1EG042727 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1990161-1995160 Theobroma cacao
Thecc1EG042727 10.0kb upstream 10.0kb upstream 14395 true scaffold_10r: 1975766-1990160 Theobroma cacao
Thecc1EG042727 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1975766-1985765 Theobroma cacao
Thecc1EG042727 10.0kb downstream 10.0kb downstream 14395 true scaffold_10r: 1985766-2000160 Theobroma cacao
Thecc1EG042727 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1990161-2000160 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840638 5264 Brassicales-Malvales View MSA
124339493 5266 SBM View MSA
124251676 5268 Malvidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain