Gene : Thecc1EG042725 T. cacao v1.1
Defline:  (1 of 5) PTHR10209//PTHR10209:SF132 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  359
Name:  ? Thecc1EG042725 Secondary Identifier:  ? PAC:27442545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042725 0.5kb upstream 0.5kb upstream 2242 true scaffold_10r: 1980449-1982690 Theobroma cacao
Thecc1EG042725 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1982191-1982690 Theobroma cacao
Thecc1EG042725 0.5kb downstream 0.5kb downstream 2242 true scaffold_10r: 1979949-1982190 Theobroma cacao
Thecc1EG042725 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1979949-1980448 Theobroma cacao
Thecc1EG042725 1.0kb upstream 1.0kb upstream 2742 true scaffold_10r: 1980449-1983190 Theobroma cacao
Thecc1EG042725 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1982191-1983190 Theobroma cacao
Thecc1EG042725 1.0kb downstream 1.0kb downstream 2742 true scaffold_10r: 1979449-1982190 Theobroma cacao
Thecc1EG042725 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1979449-1980448 Theobroma cacao
Thecc1EG042725 2.0kb upstream 2.0kb upstream 3742 true scaffold_10r: 1980449-1984190 Theobroma cacao
Thecc1EG042725 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1982191-1984190 Theobroma cacao
Thecc1EG042725 2.0kb downstream 2.0kb downstream 3742 true scaffold_10r: 1978449-1982190 Theobroma cacao
Thecc1EG042725 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1978449-1980448 Theobroma cacao
Thecc1EG042725 5.0kb upstream 5.0kb upstream 6742 true scaffold_10r: 1980449-1987190 Theobroma cacao
Thecc1EG042725 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1982191-1987190 Theobroma cacao
Thecc1EG042725 5.0kb downstream 5.0kb downstream 6742 true scaffold_10r: 1975449-1982190 Theobroma cacao
Thecc1EG042725 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1975449-1980448 Theobroma cacao
Thecc1EG042725 10.0kb upstream 10.0kb upstream 11742 true scaffold_10r: 1980449-1992190 Theobroma cacao
Thecc1EG042725 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1982191-1992190 Theobroma cacao
Thecc1EG042725 10.0kb downstream 10.0kb downstream 11742 true scaffold_10r: 1970449-1982190 Theobroma cacao
Thecc1EG042725 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1970449-1980448 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816485 5264 Brassicales-Malvales Singleton cluster - no MSA
124312881 5266 SBM Singleton cluster - no MSA
124249437 5268 Malvidae View MSA
124074813 5270 Rosid View MSA
123753452 5271 Pentapetalae View MSA
122787125 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain