Gene : Thecc1EG042730 T. cacao v1.1
Defline:  (1 of 1) PTHR31529:SF6 - LOB DOMAIN-CONTAINING PROTEIN 33 Genomic Order:  364
Name:  ? Thecc1EG042730 Secondary Identifier:  ? PAC:27442973
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042730 0.5kb upstream 0.5kb upstream 1552 true scaffold_10r: 2005156-2006707 Theobroma cacao
Thecc1EG042730 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2005156-2005655 Theobroma cacao
Thecc1EG042730 0.5kb downstream 0.5kb downstream 1552 true scaffold_10r: 2005656-2007207 Theobroma cacao
Thecc1EG042730 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2006708-2007207 Theobroma cacao
Thecc1EG042730 1.0kb upstream 1.0kb upstream 2052 true scaffold_10r: 2004656-2006707 Theobroma cacao
Thecc1EG042730 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2004656-2005655 Theobroma cacao
Thecc1EG042730 1.0kb downstream 1.0kb downstream 2052 true scaffold_10r: 2005656-2007707 Theobroma cacao
Thecc1EG042730 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2006708-2007707 Theobroma cacao
Thecc1EG042730 2.0kb upstream 2.0kb upstream 3052 true scaffold_10r: 2003656-2006707 Theobroma cacao
Thecc1EG042730 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2003656-2005655 Theobroma cacao
Thecc1EG042730 2.0kb downstream 2.0kb downstream 3052 true scaffold_10r: 2005656-2008707 Theobroma cacao
Thecc1EG042730 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2006708-2008707 Theobroma cacao
Thecc1EG042730 5.0kb upstream 5.0kb upstream 6052 true scaffold_10r: 2000656-2006707 Theobroma cacao
Thecc1EG042730 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2000656-2005655 Theobroma cacao
Thecc1EG042730 5.0kb downstream 5.0kb downstream 6052 true scaffold_10r: 2005656-2011707 Theobroma cacao
Thecc1EG042730 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2006708-2011707 Theobroma cacao
Thecc1EG042730 10.0kb upstream 10.0kb upstream 11052 true scaffold_10r: 1995656-2006707 Theobroma cacao
Thecc1EG042730 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1995656-2005655 Theobroma cacao
Thecc1EG042730 10.0kb downstream 10.0kb downstream 11052 true scaffold_10r: 2005656-2016707 Theobroma cacao
Thecc1EG042730 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2006708-2016707 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835536 5264 Brassicales-Malvales View MSA
124347286 5266 SBM View MSA
124244721 5268 Malvidae View MSA
124067335 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain