Gene : Thecc1EG042717 T. cacao v1.1
Defline:  Unknown Genomic Order:  351
Name:  ? Thecc1EG042717 Secondary Identifier:  ? PAC:27442353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042717 0.5kb upstream 0.5kb upstream 1523 true scaffold_10r: 1945339-1946861 Theobroma cacao
Thecc1EG042717 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1946362-1946861 Theobroma cacao
Thecc1EG042717 0.5kb downstream 0.5kb downstream 1523 true scaffold_10r: 1944839-1946361 Theobroma cacao
Thecc1EG042717 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1944839-1945338 Theobroma cacao
Thecc1EG042717 1.0kb upstream 1.0kb upstream 2023 true scaffold_10r: 1945339-1947361 Theobroma cacao
Thecc1EG042717 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1946362-1947361 Theobroma cacao
Thecc1EG042717 1.0kb downstream 1.0kb downstream 2023 true scaffold_10r: 1944339-1946361 Theobroma cacao
Thecc1EG042717 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1944339-1945338 Theobroma cacao
Thecc1EG042717 2.0kb upstream 2.0kb upstream 3023 true scaffold_10r: 1945339-1948361 Theobroma cacao
Thecc1EG042717 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1946362-1948361 Theobroma cacao
Thecc1EG042717 2.0kb downstream 2.0kb downstream 3023 true scaffold_10r: 1943339-1946361 Theobroma cacao
Thecc1EG042717 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1943339-1945338 Theobroma cacao
Thecc1EG042717 5.0kb upstream 5.0kb upstream 6023 true scaffold_10r: 1945339-1951361 Theobroma cacao
Thecc1EG042717 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1946362-1951361 Theobroma cacao
Thecc1EG042717 5.0kb downstream 5.0kb downstream 6023 true scaffold_10r: 1940339-1946361 Theobroma cacao
Thecc1EG042717 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1940339-1945338 Theobroma cacao
Thecc1EG042717 10.0kb upstream 10.0kb upstream 11023 true scaffold_10r: 1945339-1956361 Theobroma cacao
Thecc1EG042717 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1946362-1956361 Theobroma cacao
Thecc1EG042717 10.0kb downstream 10.0kb downstream 11023 true scaffold_10r: 1935339-1946361 Theobroma cacao
Thecc1EG042717 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1935339-1945338 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121519451 5273 Angiosperm Singleton cluster - no MSA
123816450 5264 Brassicales-Malvales Singleton cluster - no MSA
124312848 5266 SBM Singleton cluster - no MSA
124161994 5268 Malvidae Singleton cluster - no MSA
123885920 5270 Rosid Singleton cluster - no MSA
123468462 5271 Pentapetalae Singleton cluster - no MSA
122503759 5272 Eudicot Singleton cluster - no MSA
120792262 5274 Embryophyte Singleton cluster - no MSA
122833875 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain