Gene : Thecc1EG042996 T. cacao v1.1
Defline:  (1 of 15) PTHR13935 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED Genomic Order:  575
Name:  ? Thecc1EG042996 Secondary Identifier:  ? PAC:27442321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042996 0.5kb upstream 0.5kb upstream 1709 true scaffold_10r: 3341889-3343597 Theobroma cacao
Thecc1EG042996 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 3343098-3343597 Theobroma cacao
Thecc1EG042996 0.5kb downstream 0.5kb downstream 1709 true scaffold_10r: 3341389-3343097 Theobroma cacao
Thecc1EG042996 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 3341389-3341888 Theobroma cacao
Thecc1EG042996 1.0kb upstream 1.0kb upstream 2209 true scaffold_10r: 3341889-3344097 Theobroma cacao
Thecc1EG042996 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 3343098-3344097 Theobroma cacao
Thecc1EG042996 1.0kb downstream 1.0kb downstream 2209 true scaffold_10r: 3340889-3343097 Theobroma cacao
Thecc1EG042996 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 3340889-3341888 Theobroma cacao
Thecc1EG042996 2.0kb upstream 2.0kb upstream 3209 true scaffold_10r: 3341889-3345097 Theobroma cacao
Thecc1EG042996 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 3343098-3345097 Theobroma cacao
Thecc1EG042996 2.0kb downstream 2.0kb downstream 3209 true scaffold_10r: 3339889-3343097 Theobroma cacao
Thecc1EG042996 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 3339889-3341888 Theobroma cacao
Thecc1EG042996 5.0kb upstream 5.0kb upstream 6209 true scaffold_10r: 3341889-3348097 Theobroma cacao
Thecc1EG042996 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 3343098-3348097 Theobroma cacao
Thecc1EG042996 5.0kb downstream 5.0kb downstream 6209 true scaffold_10r: 3336889-3343097 Theobroma cacao
Thecc1EG042996 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 3336889-3341888 Theobroma cacao
Thecc1EG042996 10.0kb upstream 10.0kb upstream 11209 true scaffold_10r: 3341889-3353097 Theobroma cacao
Thecc1EG042996 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 3343098-3353097 Theobroma cacao
Thecc1EG042996 10.0kb downstream 10.0kb downstream 11209 true scaffold_10r: 3331889-3343097 Theobroma cacao
Thecc1EG042996 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 3331889-3341888 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
123835451 5264 Brassicales-Malvales View MSA
124339412 5266 SBM View MSA
124249700 5268 Malvidae View MSA
124071186 5270 Rosid View MSA
123742697 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain