Gene : Thecc1EG042987 T. cacao v1.1
Defline:  (1 of 4) PTHR31561:SF24 - 3-KETOACYL-COA SYNTHASE 12-RELATED Genomic Order:  568
Name:  ? Thecc1EG042987 Secondary Identifier:  ? PAC:27442968
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042987 0.5kb upstream 0.5kb upstream 2814 true scaffold_10r: 3292502-3295315 Theobroma cacao
Thecc1EG042987 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 3292502-3293001 Theobroma cacao
Thecc1EG042987 0.5kb downstream 0.5kb downstream 2814 true scaffold_10r: 3293002-3295815 Theobroma cacao
Thecc1EG042987 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 3295316-3295815 Theobroma cacao
Thecc1EG042987 1.0kb upstream 1.0kb upstream 3314 true scaffold_10r: 3292002-3295315 Theobroma cacao
Thecc1EG042987 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 3292002-3293001 Theobroma cacao
Thecc1EG042987 1.0kb downstream 1.0kb downstream 3314 true scaffold_10r: 3293002-3296315 Theobroma cacao
Thecc1EG042987 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 3295316-3296315 Theobroma cacao
Thecc1EG042987 2.0kb upstream 2.0kb upstream 4314 true scaffold_10r: 3291002-3295315 Theobroma cacao
Thecc1EG042987 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 3291002-3293001 Theobroma cacao
Thecc1EG042987 2.0kb downstream 2.0kb downstream 4314 true scaffold_10r: 3293002-3297315 Theobroma cacao
Thecc1EG042987 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 3295316-3297315 Theobroma cacao
Thecc1EG042987 5.0kb upstream 5.0kb upstream 7314 true scaffold_10r: 3288002-3295315 Theobroma cacao
Thecc1EG042987 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 3288002-3293001 Theobroma cacao
Thecc1EG042987 5.0kb downstream 5.0kb downstream 7314 true scaffold_10r: 3293002-3300315 Theobroma cacao
Thecc1EG042987 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 3295316-3300315 Theobroma cacao
Thecc1EG042987 10.0kb upstream 10.0kb upstream 12314 true scaffold_10r: 3283002-3295315 Theobroma cacao
Thecc1EG042987 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 3283002-3293001 Theobroma cacao
Thecc1EG042987 10.0kb downstream 10.0kb downstream 12314 true scaffold_10r: 3293002-3305315 Theobroma cacao
Thecc1EG042987 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 3295316-3305315 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826682 5264 Brassicales-Malvales View MSA
124321141 5266 SBM View MSA
124254150 5268 Malvidae View MSA
124066808 5270 Rosid View MSA
123741597 5271 Pentapetalae View MSA
122795783 5272 Eudicot View MSA
122043715 5273 Angiosperm View MSA
121310174 5274 Embryophyte View MSA
123347739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain