Gene : Thecc1EG042967 T. cacao v1.1
Defline:  (1 of 3) PTHR31871:SF10 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13 Genomic Order:  549
Name:  ? Thecc1EG042967 Secondary Identifier:  ? PAC:27442696
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042967 0.5kb upstream 0.5kb upstream 2018 true scaffold_10r: 3209480-3211497 Theobroma cacao
Thecc1EG042967 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 3209480-3209979 Theobroma cacao
Thecc1EG042967 0.5kb downstream 0.5kb downstream 2018 true scaffold_10r: 3209980-3211997 Theobroma cacao
Thecc1EG042967 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 3211498-3211997 Theobroma cacao
Thecc1EG042967 1.0kb upstream 1.0kb upstream 2518 true scaffold_10r: 3208980-3211497 Theobroma cacao
Thecc1EG042967 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 3208980-3209979 Theobroma cacao
Thecc1EG042967 1.0kb downstream 1.0kb downstream 2518 true scaffold_10r: 3209980-3212497 Theobroma cacao
Thecc1EG042967 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 3211498-3212497 Theobroma cacao
Thecc1EG042967 2.0kb upstream 2.0kb upstream 3518 true scaffold_10r: 3207980-3211497 Theobroma cacao
Thecc1EG042967 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 3207980-3209979 Theobroma cacao
Thecc1EG042967 2.0kb downstream 2.0kb downstream 3518 true scaffold_10r: 3209980-3213497 Theobroma cacao
Thecc1EG042967 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 3211498-3213497 Theobroma cacao
Thecc1EG042967 5.0kb upstream 5.0kb upstream 6518 true scaffold_10r: 3204980-3211497 Theobroma cacao
Thecc1EG042967 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 3204980-3209979 Theobroma cacao
Thecc1EG042967 5.0kb downstream 5.0kb downstream 6518 true scaffold_10r: 3209980-3216497 Theobroma cacao
Thecc1EG042967 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 3211498-3216497 Theobroma cacao
Thecc1EG042967 10.0kb upstream 10.0kb upstream 11518 true scaffold_10r: 3199980-3211497 Theobroma cacao
Thecc1EG042967 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 3199980-3209979 Theobroma cacao
Thecc1EG042967 10.0kb downstream 10.0kb downstream 11518 true scaffold_10r: 3209980-3221497 Theobroma cacao
Thecc1EG042967 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 3211498-3221497 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828561 5264 Brassicales-Malvales View MSA
124339450 5266 SBM View MSA
124253706 5268 Malvidae View MSA
124070789 5270 Rosid View MSA
123747492 5271 Pentapetalae View MSA
122795039 5272 Eudicot View MSA
122043868 5273 Angiosperm View MSA
121310203 5274 Embryophyte View MSA
123347760 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain