Gene : Thecc1EG042948 T. cacao v1.1
Defline:  (1 of 1) PTHR11620//PTHR11620:SF23 - 60S RIBOSOMAL PROTEIN L23A // 60S RIBOSOMAL PROTEIN L23A-1 Genomic Order:  537
Name:  ? Thecc1EG042948 Secondary Identifier:  ? PAC:27441674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042948 0.5kb upstream 0.5kb upstream 2839 true scaffold_10r: 3119787-3122625 Theobroma cacao
Thecc1EG042948 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 3122126-3122625 Theobroma cacao
Thecc1EG042948 0.5kb downstream 0.5kb downstream 2839 true scaffold_10r: 3119287-3122125 Theobroma cacao
Thecc1EG042948 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 3119287-3119786 Theobroma cacao
Thecc1EG042948 1.0kb upstream 1.0kb upstream 3339 true scaffold_10r: 3119787-3123125 Theobroma cacao
Thecc1EG042948 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 3122126-3123125 Theobroma cacao
Thecc1EG042948 1.0kb downstream 1.0kb downstream 3339 true scaffold_10r: 3118787-3122125 Theobroma cacao
Thecc1EG042948 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 3118787-3119786 Theobroma cacao
Thecc1EG042948 2.0kb upstream 2.0kb upstream 4339 true scaffold_10r: 3119787-3124125 Theobroma cacao
Thecc1EG042948 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 3122126-3124125 Theobroma cacao
Thecc1EG042948 2.0kb downstream 2.0kb downstream 4339 true scaffold_10r: 3117787-3122125 Theobroma cacao
Thecc1EG042948 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 3117787-3119786 Theobroma cacao
Thecc1EG042948 5.0kb upstream 5.0kb upstream 7339 true scaffold_10r: 3119787-3127125 Theobroma cacao
Thecc1EG042948 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 3122126-3127125 Theobroma cacao
Thecc1EG042948 5.0kb downstream 5.0kb downstream 7339 true scaffold_10r: 3114787-3122125 Theobroma cacao
Thecc1EG042948 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 3114787-3119786 Theobroma cacao
Thecc1EG042948 10.0kb upstream 10.0kb upstream 12339 true scaffold_10r: 3119787-3132125 Theobroma cacao
Thecc1EG042948 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 3122126-3132125 Theobroma cacao
Thecc1EG042948 10.0kb downstream 10.0kb downstream 12339 true scaffold_10r: 3109787-3122125 Theobroma cacao
Thecc1EG042948 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 3109787-3119786 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832766 5264 Brassicales-Malvales View MSA
124350929 5266 SBM View MSA
124253645 5268 Malvidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain