Gene : Thecc1EG042840 T. cacao v1.1
Defline:  (1 of 3) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  458
Name:  ? Thecc1EG042840 Secondary Identifier:  ? PAC:27443443
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042840 0.5kb upstream 0.5kb upstream 3386 true scaffold_10r: 2535761-2539146 Theobroma cacao
Thecc1EG042840 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2538647-2539146 Theobroma cacao
Thecc1EG042840 0.5kb downstream 0.5kb downstream 3386 true scaffold_10r: 2535261-2538646 Theobroma cacao
Thecc1EG042840 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2535261-2535760 Theobroma cacao
Thecc1EG042840 1.0kb upstream 1.0kb upstream 3886 true scaffold_10r: 2535761-2539646 Theobroma cacao
Thecc1EG042840 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2538647-2539646 Theobroma cacao
Thecc1EG042840 1.0kb downstream 1.0kb downstream 3886 true scaffold_10r: 2534761-2538646 Theobroma cacao
Thecc1EG042840 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2534761-2535760 Theobroma cacao
Thecc1EG042840 2.0kb upstream 2.0kb upstream 4886 true scaffold_10r: 2535761-2540646 Theobroma cacao
Thecc1EG042840 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2538647-2540646 Theobroma cacao
Thecc1EG042840 2.0kb downstream 2.0kb downstream 4886 true scaffold_10r: 2533761-2538646 Theobroma cacao
Thecc1EG042840 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2533761-2535760 Theobroma cacao
Thecc1EG042840 5.0kb upstream 5.0kb upstream 7886 true scaffold_10r: 2535761-2543646 Theobroma cacao
Thecc1EG042840 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2538647-2543646 Theobroma cacao
Thecc1EG042840 5.0kb downstream 5.0kb downstream 7886 true scaffold_10r: 2530761-2538646 Theobroma cacao
Thecc1EG042840 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2530761-2535760 Theobroma cacao
Thecc1EG042840 10.0kb upstream 10.0kb upstream 12886 true scaffold_10r: 2535761-2548646 Theobroma cacao
Thecc1EG042840 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2538647-2548646 Theobroma cacao
Thecc1EG042840 10.0kb downstream 10.0kb downstream 12886 true scaffold_10r: 2525761-2538646 Theobroma cacao
Thecc1EG042840 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2525761-2535760 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836538 5264 Brassicales-Malvales View MSA
124348725 5266 SBM View MSA
124243960 5268 Malvidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain