Gene : Thecc1EG042835 T. cacao v1.1
Defline:  (1 of 19) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  453
Name:  ? Thecc1EG042835 Secondary Identifier:  ? PAC:27442771
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042835 0.5kb upstream 0.5kb upstream 12399 true scaffold_10r: 2501945-2514343 Theobroma cacao
Thecc1EG042835 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 2513844-2514343 Theobroma cacao
Thecc1EG042835 0.5kb downstream 0.5kb downstream 12399 true scaffold_10r: 2501445-2513843 Theobroma cacao
Thecc1EG042835 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 2501445-2501944 Theobroma cacao
Thecc1EG042835 1.0kb upstream 1.0kb upstream 12899 true scaffold_10r: 2501945-2514843 Theobroma cacao
Thecc1EG042835 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 2513844-2514843 Theobroma cacao
Thecc1EG042835 1.0kb downstream 1.0kb downstream 12899 true scaffold_10r: 2500945-2513843 Theobroma cacao
Thecc1EG042835 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 2500945-2501944 Theobroma cacao
Thecc1EG042835 2.0kb upstream 2.0kb upstream 13899 true scaffold_10r: 2501945-2515843 Theobroma cacao
Thecc1EG042835 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 2513844-2515843 Theobroma cacao
Thecc1EG042835 2.0kb downstream 2.0kb downstream 13899 true scaffold_10r: 2499945-2513843 Theobroma cacao
Thecc1EG042835 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 2499945-2501944 Theobroma cacao
Thecc1EG042835 5.0kb upstream 5.0kb upstream 16899 true scaffold_10r: 2501945-2518843 Theobroma cacao
Thecc1EG042835 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 2513844-2518843 Theobroma cacao
Thecc1EG042835 5.0kb downstream 5.0kb downstream 16899 true scaffold_10r: 2496945-2513843 Theobroma cacao
Thecc1EG042835 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 2496945-2501944 Theobroma cacao
Thecc1EG042835 10.0kb upstream 10.0kb upstream 21899 true scaffold_10r: 2501945-2523843 Theobroma cacao
Thecc1EG042835 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 2513844-2523843 Theobroma cacao
Thecc1EG042835 10.0kb downstream 10.0kb downstream 21899 true scaffold_10r: 2491945-2513843 Theobroma cacao
Thecc1EG042835 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 2491945-2501944 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838256 5264 Brassicales-Malvales View MSA
124351593 5266 SBM View MSA
124244073 5268 Malvidae View MSA
124072132 5270 Rosid View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain