Gene : Thecc1EG043275 T. cacao v1.1
Defline:  (1 of 4) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  791
Name:  ? Thecc1EG043275 Secondary Identifier:  ? PAC:27441991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043275 0.5kb upstream 0.5kb upstream 1911 true scaffold_10r: 4929598-4931508 Theobroma cacao
Thecc1EG043275 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4931009-4931508 Theobroma cacao
Thecc1EG043275 0.5kb downstream 0.5kb downstream 1911 true scaffold_10r: 4929098-4931008 Theobroma cacao
Thecc1EG043275 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4929098-4929597 Theobroma cacao
Thecc1EG043275 1.0kb upstream 1.0kb upstream 2411 true scaffold_10r: 4929598-4932008 Theobroma cacao
Thecc1EG043275 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4931009-4932008 Theobroma cacao
Thecc1EG043275 1.0kb downstream 1.0kb downstream 2411 true scaffold_10r: 4928598-4931008 Theobroma cacao
Thecc1EG043275 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4928598-4929597 Theobroma cacao
Thecc1EG043275 2.0kb upstream 2.0kb upstream 3411 true scaffold_10r: 4929598-4933008 Theobroma cacao
Thecc1EG043275 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4931009-4933008 Theobroma cacao
Thecc1EG043275 2.0kb downstream 2.0kb downstream 3411 true scaffold_10r: 4927598-4931008 Theobroma cacao
Thecc1EG043275 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4927598-4929597 Theobroma cacao
Thecc1EG043275 5.0kb upstream 5.0kb upstream 6411 true scaffold_10r: 4929598-4936008 Theobroma cacao
Thecc1EG043275 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4931009-4936008 Theobroma cacao
Thecc1EG043275 5.0kb downstream 5.0kb downstream 6411 true scaffold_10r: 4924598-4931008 Theobroma cacao
Thecc1EG043275 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4924598-4929597 Theobroma cacao
Thecc1EG043275 10.0kb upstream 10.0kb upstream 11411 true scaffold_10r: 4929598-4941008 Theobroma cacao
Thecc1EG043275 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4931009-4941008 Theobroma cacao
Thecc1EG043275 10.0kb downstream 10.0kb downstream 11411 true scaffold_10r: 4919598-4931008 Theobroma cacao
Thecc1EG043275 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4919598-4929597 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837591 5264 Brassicales-Malvales View MSA
124341317 5266 SBM View MSA
124253320 5268 Malvidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain