Gene : Thecc1EG043268 T. cacao v1.1
Defline:  (1 of 1) 1.1.5.3//1.1.99.5 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase // Transferred entry: 1.1.5.3 Genomic Order:  787
Name:  ? Thecc1EG043268 Secondary Identifier:  ? PAC:27443886
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4261 Theobroma cacao pathologic  
Tcacao PWY-6118 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043268 0.5kb upstream 0.5kb upstream 7423 true scaffold_10r: 4867093-4874515 Theobroma cacao
Thecc1EG043268 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4867093-4867592 Theobroma cacao
Thecc1EG043268 0.5kb downstream 0.5kb downstream 7423 true scaffold_10r: 4867593-4875015 Theobroma cacao
Thecc1EG043268 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4874516-4875015 Theobroma cacao
Thecc1EG043268 1.0kb upstream 1.0kb upstream 7923 true scaffold_10r: 4866593-4874515 Theobroma cacao
Thecc1EG043268 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4866593-4867592 Theobroma cacao
Thecc1EG043268 1.0kb downstream 1.0kb downstream 7923 true scaffold_10r: 4867593-4875515 Theobroma cacao
Thecc1EG043268 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4874516-4875515 Theobroma cacao
Thecc1EG043268 2.0kb upstream 2.0kb upstream 8923 true scaffold_10r: 4865593-4874515 Theobroma cacao
Thecc1EG043268 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4865593-4867592 Theobroma cacao
Thecc1EG043268 2.0kb downstream 2.0kb downstream 8923 true scaffold_10r: 4867593-4876515 Theobroma cacao
Thecc1EG043268 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4874516-4876515 Theobroma cacao
Thecc1EG043268 5.0kb upstream 5.0kb upstream 11923 true scaffold_10r: 4862593-4874515 Theobroma cacao
Thecc1EG043268 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4862593-4867592 Theobroma cacao
Thecc1EG043268 5.0kb downstream 5.0kb downstream 11923 true scaffold_10r: 4867593-4879515 Theobroma cacao
Thecc1EG043268 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4874516-4879515 Theobroma cacao
Thecc1EG043268 10.0kb upstream 10.0kb upstream 16923 true scaffold_10r: 4857593-4874515 Theobroma cacao
Thecc1EG043268 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4857593-4867592 Theobroma cacao
Thecc1EG043268 10.0kb downstream 10.0kb downstream 16923 true scaffold_10r: 4867593-4884515 Theobroma cacao
Thecc1EG043268 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4874516-4884515 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832486 5264 Brassicales-Malvales View MSA
124343692 5266 SBM View MSA
124239485 5268 Malvidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain