Gene : Thecc1EG043250 T. cacao v1.1
Defline:  (1 of 1) PTHR10917:SF0 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Genomic Order:  773
Name:  ? Thecc1EG043250 Secondary Identifier:  ? PAC:27443858
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043250 0.5kb upstream 0.5kb upstream 2728 true scaffold_10r: 4773732-4776459 Theobroma cacao
Thecc1EG043250 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4775960-4776459 Theobroma cacao
Thecc1EG043250 0.5kb downstream 0.5kb downstream 2728 true scaffold_10r: 4773232-4775959 Theobroma cacao
Thecc1EG043250 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4773232-4773731 Theobroma cacao
Thecc1EG043250 1.0kb upstream 1.0kb upstream 3228 true scaffold_10r: 4773732-4776959 Theobroma cacao
Thecc1EG043250 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4775960-4776959 Theobroma cacao
Thecc1EG043250 1.0kb downstream 1.0kb downstream 3228 true scaffold_10r: 4772732-4775959 Theobroma cacao
Thecc1EG043250 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4772732-4773731 Theobroma cacao
Thecc1EG043250 2.0kb upstream 2.0kb upstream 4228 true scaffold_10r: 4773732-4777959 Theobroma cacao
Thecc1EG043250 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4775960-4777959 Theobroma cacao
Thecc1EG043250 2.0kb downstream 2.0kb downstream 4228 true scaffold_10r: 4771732-4775959 Theobroma cacao
Thecc1EG043250 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4771732-4773731 Theobroma cacao
Thecc1EG043250 5.0kb upstream 5.0kb upstream 7228 true scaffold_10r: 4773732-4780959 Theobroma cacao
Thecc1EG043250 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4775960-4780959 Theobroma cacao
Thecc1EG043250 5.0kb downstream 5.0kb downstream 7228 true scaffold_10r: 4768732-4775959 Theobroma cacao
Thecc1EG043250 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4768732-4773731 Theobroma cacao
Thecc1EG043250 10.0kb upstream 10.0kb upstream 12228 true scaffold_10r: 4773732-4785959 Theobroma cacao
Thecc1EG043250 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4775960-4785959 Theobroma cacao
Thecc1EG043250 10.0kb downstream 10.0kb downstream 12228 true scaffold_10r: 4763732-4775959 Theobroma cacao
Thecc1EG043250 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4763732-4773731 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841702 5264 Brassicales-Malvales View MSA
124346830 5266 SBM View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain