Gene : Thecc1EG043218 T. cacao v1.1
Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC Genomic Order:  758
Name:  ? Thecc1EG043218 Secondary Identifier:  ? PAC:27441357
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao THIOREDOX-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043218 0.5kb upstream 0.5kb upstream 4998 true scaffold_10r: 4665394-4670391 Theobroma cacao
Thecc1EG043218 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4669892-4670391 Theobroma cacao
Thecc1EG043218 0.5kb downstream 0.5kb downstream 4998 true scaffold_10r: 4664894-4669891 Theobroma cacao
Thecc1EG043218 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4664894-4665393 Theobroma cacao
Thecc1EG043218 1.0kb upstream 1.0kb upstream 5498 true scaffold_10r: 4665394-4670891 Theobroma cacao
Thecc1EG043218 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4669892-4670891 Theobroma cacao
Thecc1EG043218 1.0kb downstream 1.0kb downstream 5498 true scaffold_10r: 4664394-4669891 Theobroma cacao
Thecc1EG043218 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4664394-4665393 Theobroma cacao
Thecc1EG043218 2.0kb upstream 2.0kb upstream 6498 true scaffold_10r: 4665394-4671891 Theobroma cacao
Thecc1EG043218 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4669892-4671891 Theobroma cacao
Thecc1EG043218 2.0kb downstream 2.0kb downstream 6498 true scaffold_10r: 4663394-4669891 Theobroma cacao
Thecc1EG043218 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4663394-4665393 Theobroma cacao
Thecc1EG043218 5.0kb upstream 5.0kb upstream 9498 true scaffold_10r: 4665394-4674891 Theobroma cacao
Thecc1EG043218 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4669892-4674891 Theobroma cacao
Thecc1EG043218 5.0kb downstream 5.0kb downstream 9498 true scaffold_10r: 4660394-4669891 Theobroma cacao
Thecc1EG043218 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4660394-4665393 Theobroma cacao
Thecc1EG043218 10.0kb upstream 10.0kb upstream 14498 true scaffold_10r: 4665394-4679891 Theobroma cacao
Thecc1EG043218 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4669892-4679891 Theobroma cacao
Thecc1EG043218 10.0kb downstream 10.0kb downstream 14498 true scaffold_10r: 4655394-4669891 Theobroma cacao
Thecc1EG043218 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4655394-4665393 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834100 5264 Brassicales-Malvales View MSA
124345409 5266 SBM View MSA
124244940 5268 Malvidae View MSA
124062487 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain