Gene : Thecc1EG043174 T. cacao v1.1
Defline:  (1 of 5) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  723
Name:  ? Thecc1EG043174 Secondary Identifier:  ? PAC:27441315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043174 0.5kb upstream 0.5kb upstream 6594 true scaffold_10r: 4372803-4379396 Theobroma cacao
Thecc1EG043174 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4378897-4379396 Theobroma cacao
Thecc1EG043174 0.5kb downstream 0.5kb downstream 6594 true scaffold_10r: 4372303-4378896 Theobroma cacao
Thecc1EG043174 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4372303-4372802 Theobroma cacao
Thecc1EG043174 1.0kb upstream 1.0kb upstream 7094 true scaffold_10r: 4372803-4379896 Theobroma cacao
Thecc1EG043174 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4378897-4379896 Theobroma cacao
Thecc1EG043174 1.0kb downstream 1.0kb downstream 7094 true scaffold_10r: 4371803-4378896 Theobroma cacao
Thecc1EG043174 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4371803-4372802 Theobroma cacao
Thecc1EG043174 2.0kb upstream 2.0kb upstream 8094 true scaffold_10r: 4372803-4380896 Theobroma cacao
Thecc1EG043174 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4378897-4380896 Theobroma cacao
Thecc1EG043174 2.0kb downstream 2.0kb downstream 8094 true scaffold_10r: 4370803-4378896 Theobroma cacao
Thecc1EG043174 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4370803-4372802 Theobroma cacao
Thecc1EG043174 5.0kb upstream 5.0kb upstream 11094 true scaffold_10r: 4372803-4383896 Theobroma cacao
Thecc1EG043174 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4378897-4383896 Theobroma cacao
Thecc1EG043174 5.0kb downstream 5.0kb downstream 11094 true scaffold_10r: 4367803-4378896 Theobroma cacao
Thecc1EG043174 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4367803-4372802 Theobroma cacao
Thecc1EG043174 10.0kb upstream 10.0kb upstream 16094 true scaffold_10r: 4372803-4388896 Theobroma cacao
Thecc1EG043174 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4378897-4388896 Theobroma cacao
Thecc1EG043174 10.0kb downstream 10.0kb downstream 16094 true scaffold_10r: 4362803-4378896 Theobroma cacao
Thecc1EG043174 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4362803-4372802 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841196 5264 Brassicales-Malvales View MSA
124349703 5266 SBM View MSA
124252748 5268 Malvidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain