Gene : Thecc1EG043128 T. cacao v1.1
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  690
Name:  ? Thecc1EG043128 Secondary Identifier:  ? PAC:27441628
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARO-PWY Theobroma cacao pathologic  
Tcacao PWY-6163 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043128 0.5kb upstream 0.5kb upstream 6640 true scaffold_10r: 4092186-4098825 Theobroma cacao
Thecc1EG043128 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 4092186-4092685 Theobroma cacao
Thecc1EG043128 0.5kb downstream 0.5kb downstream 6640 true scaffold_10r: 4092686-4099325 Theobroma cacao
Thecc1EG043128 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 4098826-4099325 Theobroma cacao
Thecc1EG043128 1.0kb upstream 1.0kb upstream 7140 true scaffold_10r: 4091686-4098825 Theobroma cacao
Thecc1EG043128 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 4091686-4092685 Theobroma cacao
Thecc1EG043128 1.0kb downstream 1.0kb downstream 7140 true scaffold_10r: 4092686-4099825 Theobroma cacao
Thecc1EG043128 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 4098826-4099825 Theobroma cacao
Thecc1EG043128 2.0kb upstream 2.0kb upstream 8140 true scaffold_10r: 4090686-4098825 Theobroma cacao
Thecc1EG043128 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 4090686-4092685 Theobroma cacao
Thecc1EG043128 2.0kb downstream 2.0kb downstream 8140 true scaffold_10r: 4092686-4100825 Theobroma cacao
Thecc1EG043128 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 4098826-4100825 Theobroma cacao
Thecc1EG043128 5.0kb upstream 5.0kb upstream 11140 true scaffold_10r: 4087686-4098825 Theobroma cacao
Thecc1EG043128 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 4087686-4092685 Theobroma cacao
Thecc1EG043128 5.0kb downstream 5.0kb downstream 11140 true scaffold_10r: 4092686-4103825 Theobroma cacao
Thecc1EG043128 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 4098826-4103825 Theobroma cacao
Thecc1EG043128 10.0kb upstream 10.0kb upstream 16140 true scaffold_10r: 4082686-4098825 Theobroma cacao
Thecc1EG043128 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 4082686-4092685 Theobroma cacao
Thecc1EG043128 10.0kb downstream 10.0kb downstream 16140 true scaffold_10r: 4092686-4108825 Theobroma cacao
Thecc1EG043128 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 4098826-4108825 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
123827910 5264 Brassicales-Malvales View MSA
124346296 5266 SBM View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain