Gene : Thecc1EG043471 T. cacao v1.1
Defline:  (1 of 1) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  905
Name:  ? Thecc1EG043471 Secondary Identifier:  ? PAC:27442088
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5173 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PYRUVDEHYD-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043471 0.5kb upstream 0.5kb upstream 15645 true scaffold_10r: 6509663-6525307 Theobroma cacao
Thecc1EG043471 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 6509663-6510162 Theobroma cacao
Thecc1EG043471 0.5kb downstream 0.5kb downstream 15645 true scaffold_10r: 6510163-6525807 Theobroma cacao
Thecc1EG043471 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 6525308-6525807 Theobroma cacao
Thecc1EG043471 1.0kb upstream 1.0kb upstream 16145 true scaffold_10r: 6509163-6525307 Theobroma cacao
Thecc1EG043471 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 6509163-6510162 Theobroma cacao
Thecc1EG043471 1.0kb downstream 1.0kb downstream 16145 true scaffold_10r: 6510163-6526307 Theobroma cacao
Thecc1EG043471 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 6525308-6526307 Theobroma cacao
Thecc1EG043471 2.0kb upstream 2.0kb upstream 17145 true scaffold_10r: 6508163-6525307 Theobroma cacao
Thecc1EG043471 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 6508163-6510162 Theobroma cacao
Thecc1EG043471 2.0kb downstream 2.0kb downstream 17145 true scaffold_10r: 6510163-6527307 Theobroma cacao
Thecc1EG043471 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 6525308-6527307 Theobroma cacao
Thecc1EG043471 5.0kb upstream 5.0kb upstream 20145 true scaffold_10r: 6505163-6525307 Theobroma cacao
Thecc1EG043471 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 6505163-6510162 Theobroma cacao
Thecc1EG043471 5.0kb downstream 5.0kb downstream 20145 true scaffold_10r: 6510163-6530307 Theobroma cacao
Thecc1EG043471 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 6525308-6530307 Theobroma cacao
Thecc1EG043471 10.0kb upstream 10.0kb upstream 25145 true scaffold_10r: 6500163-6525307 Theobroma cacao
Thecc1EG043471 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 6500163-6510162 Theobroma cacao
Thecc1EG043471 10.0kb downstream 10.0kb downstream 25145 true scaffold_10r: 6510163-6535307 Theobroma cacao
Thecc1EG043471 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 6525308-6535307 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
123836955 5264 Brassicales-Malvales View MSA
124341796 5266 SBM View MSA
124242704 5268 Malvidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain