Gene : Thecc1EG043387 T. cacao v1.1
Defline:  (1 of 1) KOG0250//KOG0978//KOG0979//KOG4593//KOG4643//KOG4687 - DNA repair protein RAD18 (SMC family protein) // E3 ubiquitin ligase involved in syntaxin degradation // Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily // Mitotic checkpoint protein MAD1 // Uncharacterized coiled-coil protein // Uncharacterized coiled-coil protein Genomic Order:  859
Name:  ? Thecc1EG043387 Secondary Identifier:  ? PAC:27443968
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043387 0.5kb upstream 0.5kb upstream 23219 true scaffold_10r: 5859648-5882866 Theobroma cacao
Thecc1EG043387 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 5882367-5882866 Theobroma cacao
Thecc1EG043387 0.5kb downstream 0.5kb downstream 23219 true scaffold_10r: 5859148-5882366 Theobroma cacao
Thecc1EG043387 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 5859148-5859647 Theobroma cacao
Thecc1EG043387 1.0kb upstream 1.0kb upstream 23719 true scaffold_10r: 5859648-5883366 Theobroma cacao
Thecc1EG043387 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 5882367-5883366 Theobroma cacao
Thecc1EG043387 1.0kb downstream 1.0kb downstream 23719 true scaffold_10r: 5858648-5882366 Theobroma cacao
Thecc1EG043387 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 5858648-5859647 Theobroma cacao
Thecc1EG043387 2.0kb upstream 2.0kb upstream 24719 true scaffold_10r: 5859648-5884366 Theobroma cacao
Thecc1EG043387 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 5882367-5884366 Theobroma cacao
Thecc1EG043387 2.0kb downstream 2.0kb downstream 24719 true scaffold_10r: 5857648-5882366 Theobroma cacao
Thecc1EG043387 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 5857648-5859647 Theobroma cacao
Thecc1EG043387 5.0kb upstream 5.0kb upstream 27719 true scaffold_10r: 5859648-5887366 Theobroma cacao
Thecc1EG043387 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 5882367-5887366 Theobroma cacao
Thecc1EG043387 5.0kb downstream 5.0kb downstream 27719 true scaffold_10r: 5854648-5882366 Theobroma cacao
Thecc1EG043387 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 5854648-5859647 Theobroma cacao
Thecc1EG043387 10.0kb upstream 10.0kb upstream 32719 true scaffold_10r: 5859648-5892366 Theobroma cacao
Thecc1EG043387 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 5882367-5892366 Theobroma cacao
Thecc1EG043387 10.0kb downstream 10.0kb downstream 32719 true scaffold_10r: 5849648-5882366 Theobroma cacao
Thecc1EG043387 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 5849648-5859647 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824979 5264 Brassicales-Malvales View MSA
124347077 5266 SBM View MSA
124253325 5268 Malvidae View MSA
124071958 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain