Gene : Thecc1EG043378 T. cacao v1.1

Defline:  (1 of 3) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  855
Name:  ? Thecc1EG043378 Secondary Identifier:  ? PAC:27441288

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043378 0.5kb upstream 0.5kb upstream 7465 true scaffold_10r: 5675866-5683330 Theobroma cacao
Thecc1EG043378 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 5675866-5676365 Theobroma cacao
Thecc1EG043378 0.5kb downstream 0.5kb downstream 7465 true scaffold_10r: 5676366-5683830 Theobroma cacao
Thecc1EG043378 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 5683331-5683830 Theobroma cacao
Thecc1EG043378 1.0kb upstream 1.0kb upstream 7965 true scaffold_10r: 5675366-5683330 Theobroma cacao
Thecc1EG043378 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 5675366-5676365 Theobroma cacao
Thecc1EG043378 1.0kb downstream 1.0kb downstream 7965 true scaffold_10r: 5676366-5684330 Theobroma cacao
Thecc1EG043378 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 5683331-5684330 Theobroma cacao
Thecc1EG043378 2.0kb upstream 2.0kb upstream 8965 true scaffold_10r: 5674366-5683330 Theobroma cacao
Thecc1EG043378 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 5674366-5676365 Theobroma cacao
Thecc1EG043378 2.0kb downstream 2.0kb downstream 8965 true scaffold_10r: 5676366-5685330 Theobroma cacao
Thecc1EG043378 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 5683331-5685330 Theobroma cacao
Thecc1EG043378 5.0kb upstream 5.0kb upstream 11965 true scaffold_10r: 5671366-5683330 Theobroma cacao
Thecc1EG043378 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 5671366-5676365 Theobroma cacao
Thecc1EG043378 5.0kb downstream 5.0kb downstream 11965 true scaffold_10r: 5676366-5688330 Theobroma cacao
Thecc1EG043378 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 5683331-5688330 Theobroma cacao
Thecc1EG043378 10.0kb upstream 10.0kb upstream 16965 true scaffold_10r: 5666366-5683330 Theobroma cacao
Thecc1EG043378 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 5666366-5676365 Theobroma cacao
Thecc1EG043378 10.0kb downstream 10.0kb downstream 16965 true scaffold_10r: 5676366-5693330 Theobroma cacao
Thecc1EG043378 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 5683331-5693330 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835345 5264 Brassicales-Malvales View MSA
124337128 5266 SBM View MSA
124242695 5268 Malvidae View MSA
124068391 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain