Gene : Thecc1EG043403 T. cacao v1.1
Defline:  (1 of 1) PTHR34568:SF2 - DNA BINDING PROTEIN Genomic Order:  866
Name:  ? Thecc1EG043403 Secondary Identifier:  ? PAC:27443011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LEU-DEG2-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043403 0.5kb upstream 0.5kb upstream 13001 true scaffold_10r: 5986028-5999028 Theobroma cacao
Thecc1EG043403 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 5998529-5999028 Theobroma cacao
Thecc1EG043403 0.5kb downstream 0.5kb downstream 13001 true scaffold_10r: 5985528-5998528 Theobroma cacao
Thecc1EG043403 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 5985528-5986027 Theobroma cacao
Thecc1EG043403 1.0kb upstream 1.0kb upstream 13501 true scaffold_10r: 5986028-5999528 Theobroma cacao
Thecc1EG043403 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 5998529-5999528 Theobroma cacao
Thecc1EG043403 1.0kb downstream 1.0kb downstream 13501 true scaffold_10r: 5985028-5998528 Theobroma cacao
Thecc1EG043403 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 5985028-5986027 Theobroma cacao
Thecc1EG043403 2.0kb upstream 2.0kb upstream 14501 true scaffold_10r: 5986028-6000528 Theobroma cacao
Thecc1EG043403 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 5998529-6000528 Theobroma cacao
Thecc1EG043403 2.0kb downstream 2.0kb downstream 14501 true scaffold_10r: 5984028-5998528 Theobroma cacao
Thecc1EG043403 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 5984028-5986027 Theobroma cacao
Thecc1EG043403 5.0kb upstream 5.0kb upstream 17501 true scaffold_10r: 5986028-6003528 Theobroma cacao
Thecc1EG043403 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 5998529-6003528 Theobroma cacao
Thecc1EG043403 5.0kb downstream 5.0kb downstream 17501 true scaffold_10r: 5981028-5998528 Theobroma cacao
Thecc1EG043403 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 5981028-5986027 Theobroma cacao
Thecc1EG043403 10.0kb upstream 10.0kb upstream 22501 true scaffold_10r: 5986028-6008528 Theobroma cacao
Thecc1EG043403 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 5998529-6008528 Theobroma cacao
Thecc1EG043403 10.0kb downstream 10.0kb downstream 22501 true scaffold_10r: 5976028-5998528 Theobroma cacao
Thecc1EG043403 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 5976028-5986027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026775 5273 Angiosperm View MSA
123839775 5264 Brassicales-Malvales View MSA
124345492 5266 SBM View MSA
124240701 5268 Malvidae View MSA
124060685 5270 Rosid View MSA
123752570 5271 Pentapetalae View MSA
122794894 5272 Eudicot View MSA
121296550 5274 Embryophyte View MSA
123334696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain