Gene : Thecc1EG043361 T. cacao v1.1
Defline:  (1 of 1) 1.1.1.82 - Malate dehydrogenase (NADP(+)) / NADP-linked malate dehydrogenase Genomic Order:  845
Name:  ? Thecc1EG043361 Secondary Identifier:  ? PAC:27441565
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043361 0.5kb upstream 0.5kb upstream 6557 true scaffold_10r: 5528366-5534922 Theobroma cacao
Thecc1EG043361 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 5534423-5534922 Theobroma cacao
Thecc1EG043361 0.5kb downstream 0.5kb downstream 6557 true scaffold_10r: 5527866-5534422 Theobroma cacao
Thecc1EG043361 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 5527866-5528365 Theobroma cacao
Thecc1EG043361 1.0kb upstream 1.0kb upstream 7057 true scaffold_10r: 5528366-5535422 Theobroma cacao
Thecc1EG043361 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 5534423-5535422 Theobroma cacao
Thecc1EG043361 1.0kb downstream 1.0kb downstream 7057 true scaffold_10r: 5527366-5534422 Theobroma cacao
Thecc1EG043361 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 5527366-5528365 Theobroma cacao
Thecc1EG043361 2.0kb upstream 2.0kb upstream 8057 true scaffold_10r: 5528366-5536422 Theobroma cacao
Thecc1EG043361 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 5534423-5536422 Theobroma cacao
Thecc1EG043361 2.0kb downstream 2.0kb downstream 8057 true scaffold_10r: 5526366-5534422 Theobroma cacao
Thecc1EG043361 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 5526366-5528365 Theobroma cacao
Thecc1EG043361 5.0kb upstream 5.0kb upstream 11057 true scaffold_10r: 5528366-5539422 Theobroma cacao
Thecc1EG043361 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 5534423-5539422 Theobroma cacao
Thecc1EG043361 5.0kb downstream 5.0kb downstream 11057 true scaffold_10r: 5523366-5534422 Theobroma cacao
Thecc1EG043361 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 5523366-5528365 Theobroma cacao
Thecc1EG043361 10.0kb upstream 10.0kb upstream 16057 true scaffold_10r: 5528366-5544422 Theobroma cacao
Thecc1EG043361 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 5534423-5544422 Theobroma cacao
Thecc1EG043361 10.0kb downstream 10.0kb downstream 16057 true scaffold_10r: 5518366-5534422 Theobroma cacao
Thecc1EG043361 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 5518366-5528365 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834055 5264 Brassicales-Malvales View MSA
124344297 5266 SBM View MSA
124238897 5268 Malvidae View MSA
124061971 5270 Rosid View MSA
123738843 5271 Pentapetalae View MSA
122785596 5272 Eudicot View MSA
122041880 5273 Angiosperm View MSA
121345837 5274 Embryophyte View MSA
123423785 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain