Gene : Thecc1EG043879 T. cacao v1.1
Defline:  (1 of 1) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  1036
Name:  ? Thecc1EG043879 Secondary Identifier:  ? PAC:27442214
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043879 0.5kb upstream 0.5kb upstream 6077 true scaffold_10r: 10730883-10736959 Theobroma cacao
Thecc1EG043879 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 10736460-10736959 Theobroma cacao
Thecc1EG043879 0.5kb downstream 0.5kb downstream 6077 true scaffold_10r: 10730383-10736459 Theobroma cacao
Thecc1EG043879 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 10730383-10730882 Theobroma cacao
Thecc1EG043879 1.0kb upstream 1.0kb upstream 6577 true scaffold_10r: 10730883-10737459 Theobroma cacao
Thecc1EG043879 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 10736460-10737459 Theobroma cacao
Thecc1EG043879 1.0kb downstream 1.0kb downstream 6577 true scaffold_10r: 10729883-10736459 Theobroma cacao
Thecc1EG043879 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 10729883-10730882 Theobroma cacao
Thecc1EG043879 2.0kb upstream 2.0kb upstream 7577 true scaffold_10r: 10730883-10738459 Theobroma cacao
Thecc1EG043879 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 10736460-10738459 Theobroma cacao
Thecc1EG043879 2.0kb downstream 2.0kb downstream 7577 true scaffold_10r: 10728883-10736459 Theobroma cacao
Thecc1EG043879 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 10728883-10730882 Theobroma cacao
Thecc1EG043879 5.0kb upstream 5.0kb upstream 10577 true scaffold_10r: 10730883-10741459 Theobroma cacao
Thecc1EG043879 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 10736460-10741459 Theobroma cacao
Thecc1EG043879 5.0kb downstream 5.0kb downstream 10577 true scaffold_10r: 10725883-10736459 Theobroma cacao
Thecc1EG043879 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 10725883-10730882 Theobroma cacao
Thecc1EG043879 10.0kb upstream 10.0kb upstream 15577 true scaffold_10r: 10730883-10746459 Theobroma cacao
Thecc1EG043879 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 10736460-10746459 Theobroma cacao
Thecc1EG043879 10.0kb downstream 10.0kb downstream 15577 true scaffold_10r: 10720883-10736459 Theobroma cacao
Thecc1EG043879 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 10720883-10730882 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
123830303 5264 Brassicales-Malvales View MSA
124340099 5266 SBM View MSA
124242866 5268 Malvidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain