Gene : Thecc1EG043681 T. cacao v1.1
Defline:  (1 of 2) PTHR10359//PTHR10359:SF28 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // TRANSCRIPTIONAL ACTIVATOR DEMETER Genomic Order:  979
Name:  ? Thecc1EG043681 Secondary Identifier:  ? PAC:27442427
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043681 0.5kb upstream 0.5kb upstream 15611 true scaffold_10r: 8824897-8840507 Theobroma cacao
Thecc1EG043681 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 8824897-8825396 Theobroma cacao
Thecc1EG043681 0.5kb downstream 0.5kb downstream 15611 true scaffold_10r: 8825397-8841007 Theobroma cacao
Thecc1EG043681 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 8840508-8841007 Theobroma cacao
Thecc1EG043681 1.0kb upstream 1.0kb upstream 16111 true scaffold_10r: 8824397-8840507 Theobroma cacao
Thecc1EG043681 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 8824397-8825396 Theobroma cacao
Thecc1EG043681 1.0kb downstream 1.0kb downstream 16111 true scaffold_10r: 8825397-8841507 Theobroma cacao
Thecc1EG043681 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 8840508-8841507 Theobroma cacao
Thecc1EG043681 2.0kb upstream 2.0kb upstream 17111 true scaffold_10r: 8823397-8840507 Theobroma cacao
Thecc1EG043681 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 8823397-8825396 Theobroma cacao
Thecc1EG043681 2.0kb downstream 2.0kb downstream 17111 true scaffold_10r: 8825397-8842507 Theobroma cacao
Thecc1EG043681 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 8840508-8842507 Theobroma cacao
Thecc1EG043681 5.0kb upstream 5.0kb upstream 20111 true scaffold_10r: 8820397-8840507 Theobroma cacao
Thecc1EG043681 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 8820397-8825396 Theobroma cacao
Thecc1EG043681 5.0kb downstream 5.0kb downstream 20111 true scaffold_10r: 8825397-8845507 Theobroma cacao
Thecc1EG043681 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 8840508-8845507 Theobroma cacao
Thecc1EG043681 10.0kb upstream 10.0kb upstream 25111 true scaffold_10r: 8815397-8840507 Theobroma cacao
Thecc1EG043681 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 8815397-8825396 Theobroma cacao
Thecc1EG043681 10.0kb downstream 10.0kb downstream 25111 true scaffold_10r: 8825397-8850507 Theobroma cacao
Thecc1EG043681 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 8840508-8850507 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827503 5264 Brassicales-Malvales View MSA
124346283 5266 SBM View MSA
124251609 5268 Malvidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain