Gene : Thecc1EG044447 T. cacao v1.1
Defline:  (1 of 5) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  1217
Name:  ? Thecc1EG044447 Secondary Identifier:  ? PAC:27441302
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044447 0.5kb upstream 0.5kb upstream 4051 true scaffold_10r: 16810492-16814542 Theobroma cacao
Thecc1EG044447 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 16814043-16814542 Theobroma cacao
Thecc1EG044447 0.5kb downstream 0.5kb downstream 4051 true scaffold_10r: 16809992-16814042 Theobroma cacao
Thecc1EG044447 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 16809992-16810491 Theobroma cacao
Thecc1EG044447 1.0kb upstream 1.0kb upstream 4551 true scaffold_10r: 16810492-16815042 Theobroma cacao
Thecc1EG044447 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 16814043-16815042 Theobroma cacao
Thecc1EG044447 1.0kb downstream 1.0kb downstream 4551 true scaffold_10r: 16809492-16814042 Theobroma cacao
Thecc1EG044447 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 16809492-16810491 Theobroma cacao
Thecc1EG044447 2.0kb upstream 2.0kb upstream 5551 true scaffold_10r: 16810492-16816042 Theobroma cacao
Thecc1EG044447 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 16814043-16816042 Theobroma cacao
Thecc1EG044447 2.0kb downstream 2.0kb downstream 5551 true scaffold_10r: 16808492-16814042 Theobroma cacao
Thecc1EG044447 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 16808492-16810491 Theobroma cacao
Thecc1EG044447 5.0kb upstream 5.0kb upstream 8551 true scaffold_10r: 16810492-16819042 Theobroma cacao
Thecc1EG044447 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 16814043-16819042 Theobroma cacao
Thecc1EG044447 5.0kb downstream 5.0kb downstream 8551 true scaffold_10r: 16805492-16814042 Theobroma cacao
Thecc1EG044447 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 16805492-16810491 Theobroma cacao
Thecc1EG044447 10.0kb upstream 10.0kb upstream 13551 true scaffold_10r: 16810492-16824042 Theobroma cacao
Thecc1EG044447 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 16814043-16824042 Theobroma cacao
Thecc1EG044447 10.0kb downstream 10.0kb downstream 13551 true scaffold_10r: 16800492-16814042 Theobroma cacao
Thecc1EG044447 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 16800492-16810491 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816224 5264 Brassicales-Malvales Singleton cluster - no MSA
124351206 5266 SBM View MSA
124246617 5268 Malvidae View MSA
124060747 5270 Rosid View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain