Gene : Thecc1EG044328 T. cacao v1.1
Defline:  (1 of 1) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1154
Name:  ? Thecc1EG044328 Secondary Identifier:  ? PAC:27442519
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044328 0.5kb upstream 0.5kb upstream 4663 true scaffold_10r: 15910911-15915573 Theobroma cacao
Thecc1EG044328 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 15915074-15915573 Theobroma cacao
Thecc1EG044328 0.5kb downstream 0.5kb downstream 4663 true scaffold_10r: 15910411-15915073 Theobroma cacao
Thecc1EG044328 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 15910411-15910910 Theobroma cacao
Thecc1EG044328 1.0kb upstream 1.0kb upstream 5163 true scaffold_10r: 15910911-15916073 Theobroma cacao
Thecc1EG044328 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 15915074-15916073 Theobroma cacao
Thecc1EG044328 1.0kb downstream 1.0kb downstream 5163 true scaffold_10r: 15909911-15915073 Theobroma cacao
Thecc1EG044328 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 15909911-15910910 Theobroma cacao
Thecc1EG044328 2.0kb upstream 2.0kb upstream 6163 true scaffold_10r: 15910911-15917073 Theobroma cacao
Thecc1EG044328 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 15915074-15917073 Theobroma cacao
Thecc1EG044328 2.0kb downstream 2.0kb downstream 6163 true scaffold_10r: 15908911-15915073 Theobroma cacao
Thecc1EG044328 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 15908911-15910910 Theobroma cacao
Thecc1EG044328 5.0kb upstream 5.0kb upstream 9163 true scaffold_10r: 15910911-15920073 Theobroma cacao
Thecc1EG044328 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 15915074-15920073 Theobroma cacao
Thecc1EG044328 5.0kb downstream 5.0kb downstream 9163 true scaffold_10r: 15905911-15915073 Theobroma cacao
Thecc1EG044328 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 15905911-15910910 Theobroma cacao
Thecc1EG044328 10.0kb upstream 10.0kb upstream 14163 true scaffold_10r: 15910911-15925073 Theobroma cacao
Thecc1EG044328 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 15915074-15925073 Theobroma cacao
Thecc1EG044328 10.0kb downstream 10.0kb downstream 14163 true scaffold_10r: 15900911-15915073 Theobroma cacao
Thecc1EG044328 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 15900911-15910910 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826541 5264 Brassicales-Malvales View MSA
124321083 5266 SBM View MSA
124248281 5268 Malvidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain