Gene : Thecc1EG044087 T. cacao v1.1
Defline:  (1 of 19) KOG4282 - Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain Genomic Order:  1077
Name:  ? Thecc1EG044087 Secondary Identifier:  ? PAC:27441724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044087 0.5kb upstream 0.5kb upstream 9475 true scaffold_10r: 13401399-13410873 Theobroma cacao
Thecc1EG044087 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 13401399-13401898 Theobroma cacao
Thecc1EG044087 0.5kb downstream 0.5kb downstream 9475 true scaffold_10r: 13401899-13411373 Theobroma cacao
Thecc1EG044087 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 13410874-13411373 Theobroma cacao
Thecc1EG044087 1.0kb upstream 1.0kb upstream 9975 true scaffold_10r: 13400899-13410873 Theobroma cacao
Thecc1EG044087 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 13400899-13401898 Theobroma cacao
Thecc1EG044087 1.0kb downstream 1.0kb downstream 9975 true scaffold_10r: 13401899-13411873 Theobroma cacao
Thecc1EG044087 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 13410874-13411873 Theobroma cacao
Thecc1EG044087 2.0kb upstream 2.0kb upstream 10975 true scaffold_10r: 13399899-13410873 Theobroma cacao
Thecc1EG044087 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 13399899-13401898 Theobroma cacao
Thecc1EG044087 2.0kb downstream 2.0kb downstream 10975 true scaffold_10r: 13401899-13412873 Theobroma cacao
Thecc1EG044087 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 13410874-13412873 Theobroma cacao
Thecc1EG044087 5.0kb upstream 5.0kb upstream 13975 true scaffold_10r: 13396899-13410873 Theobroma cacao
Thecc1EG044087 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 13396899-13401898 Theobroma cacao
Thecc1EG044087 5.0kb downstream 5.0kb downstream 13975 true scaffold_10r: 13401899-13415873 Theobroma cacao
Thecc1EG044087 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 13410874-13415873 Theobroma cacao
Thecc1EG044087 10.0kb upstream 10.0kb upstream 18975 true scaffold_10r: 13391899-13410873 Theobroma cacao
Thecc1EG044087 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 13391899-13401898 Theobroma cacao
Thecc1EG044087 10.0kb downstream 10.0kb downstream 18975 true scaffold_10r: 13401899-13420873 Theobroma cacao
Thecc1EG044087 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 13410874-13420873 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824031 5264 Brassicales-Malvales View MSA
124348254 5266 SBM View MSA
124245881 5268 Malvidae View MSA
124071653 5270 Rosid View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain