Gene : Thecc1EG044606 T. cacao v1.1
Defline:  (1 of 1) PTHR31707//PTHR31707:SF21 - FAMILY NOT NAMED // PECTINESTERASE/PECTINESTERASE INHIBITOR 25-RELATED Genomic Order:  1299
Name:  ? Thecc1EG044606 Secondary Identifier:  ? PAC:27442733
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044606 0.5kb upstream 0.5kb upstream 2809 true scaffold_10r: 18121174-18123982 Theobroma cacao
Thecc1EG044606 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 18121174-18121673 Theobroma cacao
Thecc1EG044606 0.5kb downstream 0.5kb downstream 2809 true scaffold_10r: 18121674-18124482 Theobroma cacao
Thecc1EG044606 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 18123983-18124482 Theobroma cacao
Thecc1EG044606 1.0kb upstream 1.0kb upstream 3309 true scaffold_10r: 18120674-18123982 Theobroma cacao
Thecc1EG044606 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 18120674-18121673 Theobroma cacao
Thecc1EG044606 1.0kb downstream 1.0kb downstream 3309 true scaffold_10r: 18121674-18124982 Theobroma cacao
Thecc1EG044606 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 18123983-18124982 Theobroma cacao
Thecc1EG044606 2.0kb upstream 2.0kb upstream 4309 true scaffold_10r: 18119674-18123982 Theobroma cacao
Thecc1EG044606 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 18119674-18121673 Theobroma cacao
Thecc1EG044606 2.0kb downstream 2.0kb downstream 4309 true scaffold_10r: 18121674-18125982 Theobroma cacao
Thecc1EG044606 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 18123983-18125982 Theobroma cacao
Thecc1EG044606 5.0kb upstream 5.0kb upstream 7309 true scaffold_10r: 18116674-18123982 Theobroma cacao
Thecc1EG044606 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 18116674-18121673 Theobroma cacao
Thecc1EG044606 5.0kb downstream 5.0kb downstream 7309 true scaffold_10r: 18121674-18128982 Theobroma cacao
Thecc1EG044606 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 18123983-18128982 Theobroma cacao
Thecc1EG044606 10.0kb upstream 10.0kb upstream 12309 true scaffold_10r: 18111674-18123982 Theobroma cacao
Thecc1EG044606 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 18111674-18121673 Theobroma cacao
Thecc1EG044606 10.0kb downstream 10.0kb downstream 12309 true scaffold_10r: 18121674-18133982 Theobroma cacao
Thecc1EG044606 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 18123983-18133982 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816534 5264 Brassicales-Malvales Singleton cluster - no MSA
124312930 5266 SBM Singleton cluster - no MSA
124162073 5268 Malvidae Singleton cluster - no MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain