Gene : Thecc1EG044592 T. cacao v1.1
Defline:  (1 of 33) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  1290
Name:  ? Thecc1EG044592 Secondary Identifier:  ? PAC:27443744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044592 0.5kb upstream 0.5kb upstream 2507 true scaffold_10r: 18006470-18008976 Theobroma cacao
Thecc1EG044592 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 18008477-18008976 Theobroma cacao
Thecc1EG044592 0.5kb downstream 0.5kb downstream 2507 true scaffold_10r: 18005970-18008476 Theobroma cacao
Thecc1EG044592 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 18005970-18006469 Theobroma cacao
Thecc1EG044592 1.0kb upstream 1.0kb upstream 3007 true scaffold_10r: 18006470-18009476 Theobroma cacao
Thecc1EG044592 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 18008477-18009476 Theobroma cacao
Thecc1EG044592 1.0kb downstream 1.0kb downstream 3007 true scaffold_10r: 18005470-18008476 Theobroma cacao
Thecc1EG044592 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 18005470-18006469 Theobroma cacao
Thecc1EG044592 2.0kb upstream 2.0kb upstream 4007 true scaffold_10r: 18006470-18010476 Theobroma cacao
Thecc1EG044592 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 18008477-18010476 Theobroma cacao
Thecc1EG044592 2.0kb downstream 2.0kb downstream 4007 true scaffold_10r: 18004470-18008476 Theobroma cacao
Thecc1EG044592 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 18004470-18006469 Theobroma cacao
Thecc1EG044592 5.0kb upstream 5.0kb upstream 7007 true scaffold_10r: 18006470-18013476 Theobroma cacao
Thecc1EG044592 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 18008477-18013476 Theobroma cacao
Thecc1EG044592 5.0kb downstream 5.0kb downstream 7007 true scaffold_10r: 18001470-18008476 Theobroma cacao
Thecc1EG044592 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 18001470-18006469 Theobroma cacao
Thecc1EG044592 10.0kb upstream 10.0kb upstream 12007 true scaffold_10r: 18006470-18018476 Theobroma cacao
Thecc1EG044592 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 18008477-18018476 Theobroma cacao
Thecc1EG044592 10.0kb downstream 10.0kb downstream 12007 true scaffold_10r: 17996470-18008476 Theobroma cacao
Thecc1EG044592 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 17996470-18006469 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841549 5264 Brassicales-Malvales View MSA
124351604 5266 SBM View MSA
124252482 5268 Malvidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain