Gene : Thecc1EG045026 T. cacao v1.1
Defline:  (1 of 1) K03950 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6 (NDUFA6) Genomic Order:  1470
Name:  ? Thecc1EG045026 Secondary Identifier:  ? PAC:27441512
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3781 Theobroma cacao pathologic  
Tcacao PWY-4302 Theobroma cacao pathologic  
Tcacao PWY-5083 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045026 0.5kb upstream 0.5kb upstream 4145 true scaffold_10r: 21820052-21824196 Theobroma cacao
Thecc1EG045026 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 21820052-21820551 Theobroma cacao
Thecc1EG045026 0.5kb downstream 0.5kb downstream 4145 true scaffold_10r: 21820552-21824696 Theobroma cacao
Thecc1EG045026 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 21824197-21824696 Theobroma cacao
Thecc1EG045026 1.0kb upstream 1.0kb upstream 4645 true scaffold_10r: 21819552-21824196 Theobroma cacao
Thecc1EG045026 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 21819552-21820551 Theobroma cacao
Thecc1EG045026 1.0kb downstream 1.0kb downstream 4645 true scaffold_10r: 21820552-21825196 Theobroma cacao
Thecc1EG045026 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 21824197-21825196 Theobroma cacao
Thecc1EG045026 2.0kb upstream 2.0kb upstream 5645 true scaffold_10r: 21818552-21824196 Theobroma cacao
Thecc1EG045026 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 21818552-21820551 Theobroma cacao
Thecc1EG045026 2.0kb downstream 2.0kb downstream 5645 true scaffold_10r: 21820552-21826196 Theobroma cacao
Thecc1EG045026 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 21824197-21826196 Theobroma cacao
Thecc1EG045026 5.0kb upstream 5.0kb upstream 8645 true scaffold_10r: 21815552-21824196 Theobroma cacao
Thecc1EG045026 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 21815552-21820551 Theobroma cacao
Thecc1EG045026 5.0kb downstream 5.0kb downstream 8645 true scaffold_10r: 21820552-21829196 Theobroma cacao
Thecc1EG045026 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 21824197-21829196 Theobroma cacao
Thecc1EG045026 10.0kb upstream 10.0kb upstream 13645 true scaffold_10r: 21810552-21824196 Theobroma cacao
Thecc1EG045026 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 21810552-21820551 Theobroma cacao
Thecc1EG045026 10.0kb downstream 10.0kb downstream 13645 true scaffold_10r: 21820552-21834196 Theobroma cacao
Thecc1EG045026 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 21824197-21834196 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041345 5273 Angiosperm View MSA
123831504 5264 Brassicales-Malvales View MSA
124343187 5266 SBM View MSA
124239570 5268 Malvidae View MSA
124060660 5270 Rosid View MSA
123740725 5271 Pentapetalae View MSA
122787479 5272 Eudicot View MSA
121345950 5274 Embryophyte View MSA
123424820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain