Gene : Thecc1EG044785 T. cacao v1.1
Defline:  (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Genomic Order:  1412
Name:  ? Thecc1EG044785 Secondary Identifier:  ? PAC:27441641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044785 0.5kb upstream 0.5kb upstream 7043 true scaffold_10r: 19459495-19466537 Theobroma cacao
Thecc1EG044785 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19459495-19459994 Theobroma cacao
Thecc1EG044785 0.5kb downstream 0.5kb downstream 7043 true scaffold_10r: 19459995-19467037 Theobroma cacao
Thecc1EG044785 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19466538-19467037 Theobroma cacao
Thecc1EG044785 1.0kb upstream 1.0kb upstream 7543 true scaffold_10r: 19458995-19466537 Theobroma cacao
Thecc1EG044785 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19458995-19459994 Theobroma cacao
Thecc1EG044785 1.0kb downstream 1.0kb downstream 7543 true scaffold_10r: 19459995-19467537 Theobroma cacao
Thecc1EG044785 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19466538-19467537 Theobroma cacao
Thecc1EG044785 2.0kb upstream 2.0kb upstream 8543 true scaffold_10r: 19457995-19466537 Theobroma cacao
Thecc1EG044785 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19457995-19459994 Theobroma cacao
Thecc1EG044785 2.0kb downstream 2.0kb downstream 8543 true scaffold_10r: 19459995-19468537 Theobroma cacao
Thecc1EG044785 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19466538-19468537 Theobroma cacao
Thecc1EG044785 5.0kb upstream 5.0kb upstream 11543 true scaffold_10r: 19454995-19466537 Theobroma cacao
Thecc1EG044785 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19454995-19459994 Theobroma cacao
Thecc1EG044785 5.0kb downstream 5.0kb downstream 11543 true scaffold_10r: 19459995-19471537 Theobroma cacao
Thecc1EG044785 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19466538-19471537 Theobroma cacao
Thecc1EG044785 10.0kb upstream 10.0kb upstream 16543 true scaffold_10r: 19449995-19466537 Theobroma cacao
Thecc1EG044785 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19449995-19459994 Theobroma cacao
Thecc1EG044785 10.0kb downstream 10.0kb downstream 16543 true scaffold_10r: 19459995-19476537 Theobroma cacao
Thecc1EG044785 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19466538-19476537 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816289 5264 Brassicales-Malvales Singleton cluster - no MSA
124312692 5266 SBM Singleton cluster - no MSA
124161846 5268 Malvidae Singleton cluster - no MSA
123885781 5270 Rosid Singleton cluster - no MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain