Gene : Thecc1EG044775 T. cacao v1.1
Defline:  (1 of 1) PTHR33334//PTHR33334:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1404
Name:  ? Thecc1EG044775 Secondary Identifier:  ? PAC:27443281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044775 0.5kb upstream 0.5kb upstream 8104 true scaffold_10r: 19388560-19396663 Theobroma cacao
Thecc1EG044775 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19396164-19396663 Theobroma cacao
Thecc1EG044775 0.5kb downstream 0.5kb downstream 8104 true scaffold_10r: 19388060-19396163 Theobroma cacao
Thecc1EG044775 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19388060-19388559 Theobroma cacao
Thecc1EG044775 1.0kb upstream 1.0kb upstream 8604 true scaffold_10r: 19388560-19397163 Theobroma cacao
Thecc1EG044775 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19396164-19397163 Theobroma cacao
Thecc1EG044775 1.0kb downstream 1.0kb downstream 8604 true scaffold_10r: 19387560-19396163 Theobroma cacao
Thecc1EG044775 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19387560-19388559 Theobroma cacao
Thecc1EG044775 2.0kb upstream 2.0kb upstream 9604 true scaffold_10r: 19388560-19398163 Theobroma cacao
Thecc1EG044775 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19396164-19398163 Theobroma cacao
Thecc1EG044775 2.0kb downstream 2.0kb downstream 9604 true scaffold_10r: 19386560-19396163 Theobroma cacao
Thecc1EG044775 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19386560-19388559 Theobroma cacao
Thecc1EG044775 5.0kb upstream 5.0kb upstream 12604 true scaffold_10r: 19388560-19401163 Theobroma cacao
Thecc1EG044775 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19396164-19401163 Theobroma cacao
Thecc1EG044775 5.0kb downstream 5.0kb downstream 12604 true scaffold_10r: 19383560-19396163 Theobroma cacao
Thecc1EG044775 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19383560-19388559 Theobroma cacao
Thecc1EG044775 10.0kb upstream 10.0kb upstream 17604 true scaffold_10r: 19388560-19406163 Theobroma cacao
Thecc1EG044775 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19396164-19406163 Theobroma cacao
Thecc1EG044775 10.0kb downstream 10.0kb downstream 17604 true scaffold_10r: 19378560-19396163 Theobroma cacao
Thecc1EG044775 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19378560-19388559 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816658 5264 Brassicales-Malvales Singleton cluster - no MSA
124313047 5266 SBM Singleton cluster - no MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain