Gene : Thecc1EG045318 T. cacao v1.1
Defline:  (1 of 2) PTHR10315//PTHR10315:SF29 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED Genomic Order:  1639
Name:  ? Thecc1EG045318 Secondary Identifier:  ? PAC:27443135
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045318 0.5kb upstream 0.5kb upstream 4480 true scaffold_10r: 23839329-23843808 Theobroma cacao
Thecc1EG045318 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 23843309-23843808 Theobroma cacao
Thecc1EG045318 0.5kb downstream 0.5kb downstream 4480 true scaffold_10r: 23838829-23843308 Theobroma cacao
Thecc1EG045318 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 23838829-23839328 Theobroma cacao
Thecc1EG045318 1.0kb upstream 1.0kb upstream 4980 true scaffold_10r: 23839329-23844308 Theobroma cacao
Thecc1EG045318 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 23843309-23844308 Theobroma cacao
Thecc1EG045318 1.0kb downstream 1.0kb downstream 4980 true scaffold_10r: 23838329-23843308 Theobroma cacao
Thecc1EG045318 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 23838329-23839328 Theobroma cacao
Thecc1EG045318 2.0kb upstream 2.0kb upstream 5980 true scaffold_10r: 23839329-23845308 Theobroma cacao
Thecc1EG045318 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 23843309-23845308 Theobroma cacao
Thecc1EG045318 2.0kb downstream 2.0kb downstream 5980 true scaffold_10r: 23837329-23843308 Theobroma cacao
Thecc1EG045318 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 23837329-23839328 Theobroma cacao
Thecc1EG045318 5.0kb upstream 5.0kb upstream 8980 true scaffold_10r: 23839329-23848308 Theobroma cacao
Thecc1EG045318 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 23843309-23848308 Theobroma cacao
Thecc1EG045318 5.0kb downstream 5.0kb downstream 8980 true scaffold_10r: 23834329-23843308 Theobroma cacao
Thecc1EG045318 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 23834329-23839328 Theobroma cacao
Thecc1EG045318 10.0kb upstream 10.0kb upstream 13980 true scaffold_10r: 23839329-23853308 Theobroma cacao
Thecc1EG045318 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 23843309-23853308 Theobroma cacao
Thecc1EG045318 10.0kb downstream 10.0kb downstream 13980 true scaffold_10r: 23829329-23843308 Theobroma cacao
Thecc1EG045318 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 23829329-23839328 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823990 5264 Brassicales-Malvales View MSA
124349074 5266 SBM View MSA
124246275 5268 Malvidae View MSA
124069632 5270 Rosid View MSA
123750736 5271 Pentapetalae View MSA
122797657 5272 Eudicot View MSA
122049350 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain