Gene : Thecc1EG045544 T. cacao v1.1
Defline:  (1 of 3) PTHR23092//PTHR23092:SF30 - TOPOISOMERASE-RELATED PROTEIN // NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN-RELATED Genomic Order:  1809
Name:  ? Thecc1EG045544 Secondary Identifier:  ? PAC:27441497
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045544 0.5kb upstream 0.5kb upstream 11838 true scaffold_10r: 25093670-25105507 Theobroma cacao
Thecc1EG045544 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 25093670-25094169 Theobroma cacao
Thecc1EG045544 0.5kb downstream 0.5kb downstream 11838 true scaffold_10r: 25094170-25106007 Theobroma cacao
Thecc1EG045544 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 25105508-25106007 Theobroma cacao
Thecc1EG045544 1.0kb upstream 1.0kb upstream 12338 true scaffold_10r: 25093170-25105507 Theobroma cacao
Thecc1EG045544 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 25093170-25094169 Theobroma cacao
Thecc1EG045544 1.0kb downstream 1.0kb downstream 12338 true scaffold_10r: 25094170-25106507 Theobroma cacao
Thecc1EG045544 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 25105508-25106507 Theobroma cacao
Thecc1EG045544 2.0kb upstream 2.0kb upstream 13338 true scaffold_10r: 25092170-25105507 Theobroma cacao
Thecc1EG045544 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 25092170-25094169 Theobroma cacao
Thecc1EG045544 2.0kb downstream 2.0kb downstream 13338 true scaffold_10r: 25094170-25107507 Theobroma cacao
Thecc1EG045544 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 25105508-25107507 Theobroma cacao
Thecc1EG045544 5.0kb upstream 5.0kb upstream 16338 true scaffold_10r: 25089170-25105507 Theobroma cacao
Thecc1EG045544 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 25089170-25094169 Theobroma cacao
Thecc1EG045544 5.0kb downstream 5.0kb downstream 16338 true scaffold_10r: 25094170-25110507 Theobroma cacao
Thecc1EG045544 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 25105508-25110507 Theobroma cacao
Thecc1EG045544 10.0kb upstream 10.0kb upstream 21338 true scaffold_10r: 25084170-25105507 Theobroma cacao
Thecc1EG045544 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 25084170-25094169 Theobroma cacao
Thecc1EG045544 10.0kb downstream 10.0kb downstream 21338 true scaffold_10r: 25094170-25115507 Theobroma cacao
Thecc1EG045544 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 25105508-25115507 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828925 5264 Brassicales-Malvales View MSA
124350387 5266 SBM View MSA
124251652 5268 Malvidae View MSA
124069788 5270 Rosid View MSA
123744457 5271 Pentapetalae View MSA
122791987 5272 Eudicot View MSA
122043315 5273 Angiosperm View MSA
121310107 5274 Embryophyte View MSA
123428025 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain