Gene : Thecc1EG045490 T. cacao v1.1
Defline:  (1 of 1) K15437 - aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AIMP1, ARC1) Genomic Order:  1767
Name:  ? Thecc1EG045490 Secondary Identifier:  ? PAC:27444015
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045490 0.5kb upstream 0.5kb upstream 8859 true scaffold_10r: 24799607-24808465 Theobroma cacao
Thecc1EG045490 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 24807966-24808465 Theobroma cacao
Thecc1EG045490 0.5kb downstream 0.5kb downstream 8859 true scaffold_10r: 24799107-24807965 Theobroma cacao
Thecc1EG045490 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 24799107-24799606 Theobroma cacao
Thecc1EG045490 1.0kb upstream 1.0kb upstream 9359 true scaffold_10r: 24799607-24808965 Theobroma cacao
Thecc1EG045490 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 24807966-24808965 Theobroma cacao
Thecc1EG045490 1.0kb downstream 1.0kb downstream 9359 true scaffold_10r: 24798607-24807965 Theobroma cacao
Thecc1EG045490 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 24798607-24799606 Theobroma cacao
Thecc1EG045490 2.0kb upstream 2.0kb upstream 10359 true scaffold_10r: 24799607-24809965 Theobroma cacao
Thecc1EG045490 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 24807966-24809965 Theobroma cacao
Thecc1EG045490 2.0kb downstream 2.0kb downstream 10359 true scaffold_10r: 24797607-24807965 Theobroma cacao
Thecc1EG045490 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 24797607-24799606 Theobroma cacao
Thecc1EG045490 5.0kb upstream 5.0kb upstream 13359 true scaffold_10r: 24799607-24812965 Theobroma cacao
Thecc1EG045490 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 24807966-24812965 Theobroma cacao
Thecc1EG045490 5.0kb downstream 5.0kb downstream 13359 true scaffold_10r: 24794607-24807965 Theobroma cacao
Thecc1EG045490 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 24794607-24799606 Theobroma cacao
Thecc1EG045490 10.0kb upstream 10.0kb upstream 18359 true scaffold_10r: 24799607-24817965 Theobroma cacao
Thecc1EG045490 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 24807966-24817965 Theobroma cacao
Thecc1EG045490 10.0kb downstream 10.0kb downstream 18359 true scaffold_10r: 24789607-24807965 Theobroma cacao
Thecc1EG045490 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 24789607-24799606 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838875 5264 Brassicales-Malvales View MSA
124339566 5266 SBM View MSA
124237749 5268 Malvidae View MSA
124063262 5270 Rosid View MSA
123740350 5271 Pentapetalae View MSA
122787501 5272 Eudicot View MSA
122043552 5273 Angiosperm View MSA
121350669 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain