Gene : Thecc1EG045492 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1769
Name:  ? Thecc1EG045492 Secondary Identifier:  ? PAC:27442330
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045492 0.5kb upstream 0.5kb upstream 4741 true scaffold_10r: 24819041-24823781 Theobroma cacao
Thecc1EG045492 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 24819041-24819540 Theobroma cacao
Thecc1EG045492 0.5kb downstream 0.5kb downstream 4741 true scaffold_10r: 24819541-24824281 Theobroma cacao
Thecc1EG045492 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 24823782-24824281 Theobroma cacao
Thecc1EG045492 1.0kb upstream 1.0kb upstream 5241 true scaffold_10r: 24818541-24823781 Theobroma cacao
Thecc1EG045492 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 24818541-24819540 Theobroma cacao
Thecc1EG045492 1.0kb downstream 1.0kb downstream 5241 true scaffold_10r: 24819541-24824781 Theobroma cacao
Thecc1EG045492 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 24823782-24824781 Theobroma cacao
Thecc1EG045492 2.0kb upstream 2.0kb upstream 6241 true scaffold_10r: 24817541-24823781 Theobroma cacao
Thecc1EG045492 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 24817541-24819540 Theobroma cacao
Thecc1EG045492 2.0kb downstream 2.0kb downstream 6241 true scaffold_10r: 24819541-24825781 Theobroma cacao
Thecc1EG045492 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 24823782-24825781 Theobroma cacao
Thecc1EG045492 5.0kb upstream 5.0kb upstream 9241 true scaffold_10r: 24814541-24823781 Theobroma cacao
Thecc1EG045492 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 24814541-24819540 Theobroma cacao
Thecc1EG045492 5.0kb downstream 5.0kb downstream 9241 true scaffold_10r: 24819541-24828781 Theobroma cacao
Thecc1EG045492 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 24823782-24828781 Theobroma cacao
Thecc1EG045492 10.0kb upstream 10.0kb upstream 14241 true scaffold_10r: 24809541-24823781 Theobroma cacao
Thecc1EG045492 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 24809541-24819540 Theobroma cacao
Thecc1EG045492 10.0kb downstream 10.0kb downstream 14241 true scaffold_10r: 24819541-24833781 Theobroma cacao
Thecc1EG045492 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 24823782-24833781 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829100 5264 Brassicales-Malvales View MSA
124342772 5266 SBM View MSA
124238356 5268 Malvidae View MSA
124062465 5270 Rosid View MSA
123739222 5271 Pentapetalae View MSA
122787096 5272 Eudicot View MSA
122044895 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain