Gene : Thecc1EG045394 T. cacao v1.1
Defline:  (1 of 2) PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  1696
Name:  ? Thecc1EG045394 Secondary Identifier:  ? PAC:27442172
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045394 0.5kb upstream 0.5kb upstream 11395 true scaffold_10r: 24269471-24280865 Theobroma cacao
Thecc1EG045394 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 24280366-24280865 Theobroma cacao
Thecc1EG045394 0.5kb downstream 0.5kb downstream 11395 true scaffold_10r: 24268971-24280365 Theobroma cacao
Thecc1EG045394 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 24268971-24269470 Theobroma cacao
Thecc1EG045394 1.0kb upstream 1.0kb upstream 11895 true scaffold_10r: 24269471-24281365 Theobroma cacao
Thecc1EG045394 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 24280366-24281365 Theobroma cacao
Thecc1EG045394 1.0kb downstream 1.0kb downstream 11895 true scaffold_10r: 24268471-24280365 Theobroma cacao
Thecc1EG045394 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 24268471-24269470 Theobroma cacao
Thecc1EG045394 2.0kb upstream 2.0kb upstream 12895 true scaffold_10r: 24269471-24282365 Theobroma cacao
Thecc1EG045394 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 24280366-24282365 Theobroma cacao
Thecc1EG045394 2.0kb downstream 2.0kb downstream 12895 true scaffold_10r: 24267471-24280365 Theobroma cacao
Thecc1EG045394 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 24267471-24269470 Theobroma cacao
Thecc1EG045394 5.0kb upstream 5.0kb upstream 15895 true scaffold_10r: 24269471-24285365 Theobroma cacao
Thecc1EG045394 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 24280366-24285365 Theobroma cacao
Thecc1EG045394 5.0kb downstream 5.0kb downstream 15895 true scaffold_10r: 24264471-24280365 Theobroma cacao
Thecc1EG045394 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 24264471-24269470 Theobroma cacao
Thecc1EG045394 10.0kb upstream 10.0kb upstream 20895 true scaffold_10r: 24269471-24290365 Theobroma cacao
Thecc1EG045394 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 24280366-24290365 Theobroma cacao
Thecc1EG045394 10.0kb downstream 10.0kb downstream 20895 true scaffold_10r: 24259471-24280365 Theobroma cacao
Thecc1EG045394 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 24259471-24269470 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825516 5264 Brassicales-Malvales View MSA
124320636 5266 SBM View MSA
124249246 5268 Malvidae View MSA
124074149 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain