Gene : Thecc1EG045874 T. cacao v1.1
Defline:  (1 of 2) PTHR10091//PTHR10091:SF10 - ALDOSE-1-EPIMERASE // ALDOSE 1-EPIMERASE-RELATED Genomic Order:  13
Name:  ? Thecc1EG045874 Secondary Identifier:  ? PAC:27441182
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY66-422 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045874 0.5kb upstream 0.5kb upstream 6989 true scaffold_12: 857963-864951 Theobroma cacao
Thecc1EG045874 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 857963-858462 Theobroma cacao
Thecc1EG045874 0.5kb downstream 0.5kb downstream 6989 true scaffold_12: 858463-865451 Theobroma cacao
Thecc1EG045874 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 864952-865451 Theobroma cacao
Thecc1EG045874 1.0kb upstream 1.0kb upstream 7489 true scaffold_12: 857463-864951 Theobroma cacao
Thecc1EG045874 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 857463-858462 Theobroma cacao
Thecc1EG045874 1.0kb downstream 1.0kb downstream 7489 true scaffold_12: 858463-865951 Theobroma cacao
Thecc1EG045874 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 864952-865951 Theobroma cacao
Thecc1EG045874 2.0kb upstream 2.0kb upstream 8489 true scaffold_12: 856463-864951 Theobroma cacao
Thecc1EG045874 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 856463-858462 Theobroma cacao
Thecc1EG045874 2.0kb downstream 2.0kb downstream 8489 true scaffold_12: 858463-866951 Theobroma cacao
Thecc1EG045874 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 864952-866951 Theobroma cacao
Thecc1EG045874 5.0kb upstream 5.0kb upstream 11489 true scaffold_12: 853463-864951 Theobroma cacao
Thecc1EG045874 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 853463-858462 Theobroma cacao
Thecc1EG045874 5.0kb downstream 5.0kb downstream 11489 true scaffold_12: 858463-869951 Theobroma cacao
Thecc1EG045874 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 864952-869951 Theobroma cacao
Thecc1EG045874 10.0kb upstream 10.0kb upstream 16489 true scaffold_12: 848463-864951 Theobroma cacao
Thecc1EG045874 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 848463-858462 Theobroma cacao
Thecc1EG045874 10.0kb downstream 10.0kb downstream 16489 true scaffold_12: 858463-874951 Theobroma cacao
Thecc1EG045874 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 864952-874951 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826574 5264 Brassicales-Malvales View MSA
124349035 5266 SBM View MSA
124244913 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain