Gene : Thecc1EG045715 T. cacao v1.1

Defline:  (1 of 1) PTHR10641//PTHR10641:SF649 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR Genomic Order:  12
Name:  ? Thecc1EG045715 Secondary Identifier:  ? PAC:27441210

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045715 0.5kb upstream 0.5kb upstream 4168 true scaffold_11: 973480-977647 Theobroma cacao
Thecc1EG045715 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 973480-973979 Theobroma cacao
Thecc1EG045715 0.5kb downstream 0.5kb downstream 4168 true scaffold_11: 973980-978147 Theobroma cacao
Thecc1EG045715 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 977648-978147 Theobroma cacao
Thecc1EG045715 1.0kb upstream 1.0kb upstream 4668 true scaffold_11: 972980-977647 Theobroma cacao
Thecc1EG045715 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 972980-973979 Theobroma cacao
Thecc1EG045715 1.0kb downstream 1.0kb downstream 4668 true scaffold_11: 973980-978647 Theobroma cacao
Thecc1EG045715 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 977648-978647 Theobroma cacao
Thecc1EG045715 2.0kb upstream 2.0kb upstream 5668 true scaffold_11: 971980-977647 Theobroma cacao
Thecc1EG045715 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 971980-973979 Theobroma cacao
Thecc1EG045715 2.0kb downstream 2.0kb downstream 5668 true scaffold_11: 973980-979647 Theobroma cacao
Thecc1EG045715 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 977648-979647 Theobroma cacao
Thecc1EG045715 5.0kb upstream 5.0kb upstream 8668 true scaffold_11: 968980-977647 Theobroma cacao
Thecc1EG045715 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 968980-973979 Theobroma cacao
Thecc1EG045715 5.0kb downstream 5.0kb downstream 8668 true scaffold_11: 973980-982647 Theobroma cacao
Thecc1EG045715 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 977648-982647 Theobroma cacao
Thecc1EG045715 10.0kb upstream 10.0kb upstream 13668 true scaffold_11: 963980-977647 Theobroma cacao
Thecc1EG045715 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 963980-973979 Theobroma cacao
Thecc1EG045715 10.0kb downstream 10.0kb downstream 13668 true scaffold_11: 973980-987647 Theobroma cacao
Thecc1EG045715 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 977648-987647 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838141 5264 Brassicales-Malvales View MSA
124347477 5266 SBM View MSA
124245509 5268 Malvidae View MSA
124071905 5270 Rosid View MSA
123742365 5271 Pentapetalae View MSA
122786353 5272 Eudicot View MSA
122041788 5273 Angiosperm View MSA
121350452 5274 Embryophyte View MSA
123381739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain