Gene : Thecc1EG047099 T. cacao v1.1
Defline:  (1 of 1) PTHR13872:SF23 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  1431
Name:  ? Thecc1EG047099 Secondary Identifier:  ? PAC:27443069
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047099 0.5kb upstream 0.5kb upstream 5309 true scaffold_10r: 19703460-19708768 Theobroma cacao
Thecc1EG047099 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19708269-19708768 Theobroma cacao
Thecc1EG047099 0.5kb downstream 0.5kb downstream 5309 true scaffold_10r: 19702960-19708268 Theobroma cacao
Thecc1EG047099 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19702960-19703459 Theobroma cacao
Thecc1EG047099 1.0kb upstream 1.0kb upstream 5809 true scaffold_10r: 19703460-19709268 Theobroma cacao
Thecc1EG047099 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19708269-19709268 Theobroma cacao
Thecc1EG047099 1.0kb downstream 1.0kb downstream 5809 true scaffold_10r: 19702460-19708268 Theobroma cacao
Thecc1EG047099 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19702460-19703459 Theobroma cacao
Thecc1EG047099 2.0kb upstream 2.0kb upstream 6809 true scaffold_10r: 19703460-19710268 Theobroma cacao
Thecc1EG047099 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19708269-19710268 Theobroma cacao
Thecc1EG047099 2.0kb downstream 2.0kb downstream 6809 true scaffold_10r: 19701460-19708268 Theobroma cacao
Thecc1EG047099 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19701460-19703459 Theobroma cacao
Thecc1EG047099 5.0kb upstream 5.0kb upstream 9809 true scaffold_10r: 19703460-19713268 Theobroma cacao
Thecc1EG047099 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19708269-19713268 Theobroma cacao
Thecc1EG047099 5.0kb downstream 5.0kb downstream 9809 true scaffold_10r: 19698460-19708268 Theobroma cacao
Thecc1EG047099 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19698460-19703459 Theobroma cacao
Thecc1EG047099 10.0kb upstream 10.0kb upstream 14809 true scaffold_10r: 19703460-19718268 Theobroma cacao
Thecc1EG047099 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19708269-19718268 Theobroma cacao
Thecc1EG047099 10.0kb downstream 10.0kb downstream 14809 true scaffold_10r: 19693460-19708268 Theobroma cacao
Thecc1EG047099 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19693460-19703459 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836539 5264 Brassicales-Malvales View MSA
124338234 5266 SBM View MSA
124250175 5268 Malvidae View MSA
124065943 5270 Rosid View MSA
123746907 5271 Pentapetalae View MSA
122791505 5272 Eudicot View MSA
122045472 5273 Angiosperm View MSA
121344925 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain