Gene : Thecc1EG045582 T. cacao v1.1
Defline:  (1 of 12) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1840
Name:  ? Thecc1EG045582 Secondary Identifier:  ? PAC:27443507
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045582 0.5kb upstream 0.5kb upstream 5971 true scaffold_10r: 25249945-25255915 Theobroma cacao
Thecc1EG045582 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 25255416-25255915 Theobroma cacao
Thecc1EG045582 0.5kb downstream 0.5kb downstream 5971 true scaffold_10r: 25249445-25255415 Theobroma cacao
Thecc1EG045582 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 25249445-25249944 Theobroma cacao
Thecc1EG045582 1.0kb upstream 1.0kb upstream 6471 true scaffold_10r: 25249945-25256415 Theobroma cacao
Thecc1EG045582 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 25255416-25256415 Theobroma cacao
Thecc1EG045582 1.0kb downstream 1.0kb downstream 6471 true scaffold_10r: 25248945-25255415 Theobroma cacao
Thecc1EG045582 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 25248945-25249944 Theobroma cacao
Thecc1EG045582 2.0kb upstream 2.0kb upstream 7471 true scaffold_10r: 25249945-25257415 Theobroma cacao
Thecc1EG045582 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 25255416-25257415 Theobroma cacao
Thecc1EG045582 2.0kb downstream 2.0kb downstream 7471 true scaffold_10r: 25247945-25255415 Theobroma cacao
Thecc1EG045582 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 25247945-25249944 Theobroma cacao
Thecc1EG045582 5.0kb upstream 5.0kb upstream 10471 true scaffold_10r: 25249945-25260415 Theobroma cacao
Thecc1EG045582 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 25255416-25260415 Theobroma cacao
Thecc1EG045582 5.0kb downstream 5.0kb downstream 10471 true scaffold_10r: 25244945-25255415 Theobroma cacao
Thecc1EG045582 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 25244945-25249944 Theobroma cacao
Thecc1EG045582 10.0kb upstream 10.0kb upstream 15471 true scaffold_10r: 25249945-25265415 Theobroma cacao
Thecc1EG045582 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 25255416-25265415 Theobroma cacao
Thecc1EG045582 10.0kb downstream 10.0kb downstream 15471 true scaffold_10r: 25239945-25255415 Theobroma cacao
Thecc1EG045582 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 25239945-25249944 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
123830531 5264 Brassicales-Malvales View MSA
124347816 5266 SBM View MSA
124243814 5268 Malvidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain