Gene : Thecc1EG006060 T. cacao v1.1
Defline:  (1 of 2) 4.1.1.25//4.1.1.28 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase // Aromatic-L-amino-acid decarboxylase / Tryptophan decarboxylase Genomic Order:  89
Name:  ? Thecc1EG006060 Secondary Identifier:  ? PAC:27461128
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6030 Theobroma cacao pathologic  
Tcacao PWY-6802 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006060 0.5kb upstream 0.5kb upstream 19990 true scaffold_2: 544181-564170 Theobroma cacao
Thecc1EG006060 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 544181-544680 Theobroma cacao
Thecc1EG006060 0.5kb downstream 0.5kb downstream 19990 true scaffold_2: 544681-564670 Theobroma cacao
Thecc1EG006060 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 564171-564670 Theobroma cacao
Thecc1EG006060 1.0kb upstream 1.0kb upstream 20490 true scaffold_2: 543681-564170 Theobroma cacao
Thecc1EG006060 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 543681-544680 Theobroma cacao
Thecc1EG006060 1.0kb downstream 1.0kb downstream 20490 true scaffold_2: 544681-565170 Theobroma cacao
Thecc1EG006060 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 564171-565170 Theobroma cacao
Thecc1EG006060 2.0kb upstream 2.0kb upstream 21490 true scaffold_2: 542681-564170 Theobroma cacao
Thecc1EG006060 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 542681-544680 Theobroma cacao
Thecc1EG006060 2.0kb downstream 2.0kb downstream 21490 true scaffold_2: 544681-566170 Theobroma cacao
Thecc1EG006060 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 564171-566170 Theobroma cacao
Thecc1EG006060 5.0kb upstream 5.0kb upstream 24490 true scaffold_2: 539681-564170 Theobroma cacao
Thecc1EG006060 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 539681-544680 Theobroma cacao
Thecc1EG006060 5.0kb downstream 5.0kb downstream 24490 true scaffold_2: 544681-569170 Theobroma cacao
Thecc1EG006060 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 564171-569170 Theobroma cacao
Thecc1EG006060 10.0kb upstream 10.0kb upstream 29490 true scaffold_2: 534681-564170 Theobroma cacao
Thecc1EG006060 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 534681-544680 Theobroma cacao
Thecc1EG006060 10.0kb downstream 10.0kb downstream 29490 true scaffold_2: 544681-574170 Theobroma cacao
Thecc1EG006060 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 564171-574170 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842287 5264 Brassicales-Malvales View MSA
124351475 5266 SBM View MSA
124253031 5268 Malvidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain