Gene : Thecc1EG006066 T. cacao v1.1
Defline:  (1 of 2) PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  93
Name:  ? Thecc1EG006066 Secondary Identifier:  ? PAC:27464769
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006066 0.5kb upstream 0.5kb upstream 5439 true scaffold_2: 598579-604017 Theobroma cacao
Thecc1EG006066 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 598579-599078 Theobroma cacao
Thecc1EG006066 0.5kb downstream 0.5kb downstream 5439 true scaffold_2: 599079-604517 Theobroma cacao
Thecc1EG006066 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 604018-604517 Theobroma cacao
Thecc1EG006066 1.0kb upstream 1.0kb upstream 5939 true scaffold_2: 598079-604017 Theobroma cacao
Thecc1EG006066 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 598079-599078 Theobroma cacao
Thecc1EG006066 1.0kb downstream 1.0kb downstream 5939 true scaffold_2: 599079-605017 Theobroma cacao
Thecc1EG006066 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 604018-605017 Theobroma cacao
Thecc1EG006066 2.0kb upstream 2.0kb upstream 6939 true scaffold_2: 597079-604017 Theobroma cacao
Thecc1EG006066 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 597079-599078 Theobroma cacao
Thecc1EG006066 2.0kb downstream 2.0kb downstream 6939 true scaffold_2: 599079-606017 Theobroma cacao
Thecc1EG006066 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 604018-606017 Theobroma cacao
Thecc1EG006066 5.0kb upstream 5.0kb upstream 9939 true scaffold_2: 594079-604017 Theobroma cacao
Thecc1EG006066 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 594079-599078 Theobroma cacao
Thecc1EG006066 5.0kb downstream 5.0kb downstream 9939 true scaffold_2: 599079-609017 Theobroma cacao
Thecc1EG006066 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 604018-609017 Theobroma cacao
Thecc1EG006066 10.0kb upstream 10.0kb upstream 14939 true scaffold_2: 589079-604017 Theobroma cacao
Thecc1EG006066 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 589079-599078 Theobroma cacao
Thecc1EG006066 10.0kb downstream 10.0kb downstream 14939 true scaffold_2: 599079-614017 Theobroma cacao
Thecc1EG006066 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 604018-614017 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841181 5264 Brassicales-Malvales View MSA
124347410 5266 SBM View MSA
124245481 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain