Gene : Thecc1EG006012 T. cacao v1.1
Defline:  (1 of 25) PF05678 - VQ motif (VQ) Genomic Order:  49
Name:  ? Thecc1EG006012 Secondary Identifier:  ? PAC:27463170
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006012 0.5kb upstream 0.5kb upstream 1931 true scaffold_2: 274858-276788 Theobroma cacao
Thecc1EG006012 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 276289-276788 Theobroma cacao
Thecc1EG006012 0.5kb downstream 0.5kb downstream 1931 true scaffold_2: 274358-276288 Theobroma cacao
Thecc1EG006012 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 274358-274857 Theobroma cacao
Thecc1EG006012 1.0kb upstream 1.0kb upstream 2431 true scaffold_2: 274858-277288 Theobroma cacao
Thecc1EG006012 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 276289-277288 Theobroma cacao
Thecc1EG006012 1.0kb downstream 1.0kb downstream 2431 true scaffold_2: 273858-276288 Theobroma cacao
Thecc1EG006012 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 273858-274857 Theobroma cacao
Thecc1EG006012 2.0kb upstream 2.0kb upstream 3431 true scaffold_2: 274858-278288 Theobroma cacao
Thecc1EG006012 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 276289-278288 Theobroma cacao
Thecc1EG006012 2.0kb downstream 2.0kb downstream 3431 true scaffold_2: 272858-276288 Theobroma cacao
Thecc1EG006012 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 272858-274857 Theobroma cacao
Thecc1EG006012 5.0kb upstream 5.0kb upstream 6431 true scaffold_2: 274858-281288 Theobroma cacao
Thecc1EG006012 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 276289-281288 Theobroma cacao
Thecc1EG006012 5.0kb downstream 5.0kb downstream 6431 true scaffold_2: 269858-276288 Theobroma cacao
Thecc1EG006012 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 269858-274857 Theobroma cacao
Thecc1EG006012 10.0kb upstream 10.0kb upstream 11431 true scaffold_2: 274858-286288 Theobroma cacao
Thecc1EG006012 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 276289-286288 Theobroma cacao
Thecc1EG006012 10.0kb downstream 10.0kb downstream 11431 true scaffold_2: 264858-276288 Theobroma cacao
Thecc1EG006012 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 264858-274857 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826279 5264 Brassicales-Malvales View MSA
124320970 5266 SBM View MSA
124253945 5268 Malvidae View MSA
124071410 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain