Gene : Thecc1EG005982 T. cacao v1.1
Defline:  Pentatricopeptide repeat-containing protein Genomic Order:  25
Name:  ? Thecc1EG005982 Secondary Identifier:  ? PAC:27461163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005982 0.5kb upstream 0.5kb upstream 2013 true scaffold_2: 163848-165860 Theobroma cacao
Thecc1EG005982 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 163848-164347 Theobroma cacao
Thecc1EG005982 0.5kb downstream 0.5kb downstream 2013 true scaffold_2: 164348-166360 Theobroma cacao
Thecc1EG005982 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 165861-166360 Theobroma cacao
Thecc1EG005982 1.0kb upstream 1.0kb upstream 2513 true scaffold_2: 163348-165860 Theobroma cacao
Thecc1EG005982 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 163348-164347 Theobroma cacao
Thecc1EG005982 1.0kb downstream 1.0kb downstream 2513 true scaffold_2: 164348-166860 Theobroma cacao
Thecc1EG005982 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 165861-166860 Theobroma cacao
Thecc1EG005982 2.0kb upstream 2.0kb upstream 3513 true scaffold_2: 162348-165860 Theobroma cacao
Thecc1EG005982 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 162348-164347 Theobroma cacao
Thecc1EG005982 2.0kb downstream 2.0kb downstream 3513 true scaffold_2: 164348-167860 Theobroma cacao
Thecc1EG005982 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 165861-167860 Theobroma cacao
Thecc1EG005982 5.0kb upstream 5.0kb upstream 6513 true scaffold_2: 159348-165860 Theobroma cacao
Thecc1EG005982 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 159348-164347 Theobroma cacao
Thecc1EG005982 5.0kb downstream 5.0kb downstream 6513 true scaffold_2: 164348-170860 Theobroma cacao
Thecc1EG005982 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 165861-170860 Theobroma cacao
Thecc1EG005982 10.0kb upstream 10.0kb upstream 11513 true scaffold_2: 154348-165860 Theobroma cacao
Thecc1EG005982 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 154348-164347 Theobroma cacao
Thecc1EG005982 10.0kb downstream 10.0kb downstream 11513 true scaffold_2: 164348-175860 Theobroma cacao
Thecc1EG005982 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 165861-175860 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827067 5264 Brassicales-Malvales View MSA
124321292 5266 SBM View MSA
124248450 5268 Malvidae View MSA
124071969 5270 Rosid View MSA
123744703 5271 Pentapetalae View MSA
122795572 5272 Eudicot View MSA
122049160 5273 Angiosperm View MSA
121311273 5274 Embryophyte View MSA
123348588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain