Gene : Thecc1EG006205 T. cacao v1.1
Defline:  (1 of 4) PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  207
Name:  ? Thecc1EG006205 Secondary Identifier:  ? PAC:27463934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006205 0.5kb upstream 0.5kb upstream 4939 true scaffold_2: 1197813-1202751 Theobroma cacao
Thecc1EG006205 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1197813-1198312 Theobroma cacao
Thecc1EG006205 0.5kb downstream 0.5kb downstream 4939 true scaffold_2: 1198313-1203251 Theobroma cacao
Thecc1EG006205 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1202752-1203251 Theobroma cacao
Thecc1EG006205 1.0kb upstream 1.0kb upstream 5439 true scaffold_2: 1197313-1202751 Theobroma cacao
Thecc1EG006205 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1197313-1198312 Theobroma cacao
Thecc1EG006205 1.0kb downstream 1.0kb downstream 5439 true scaffold_2: 1198313-1203751 Theobroma cacao
Thecc1EG006205 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1202752-1203751 Theobroma cacao
Thecc1EG006205 2.0kb upstream 2.0kb upstream 6439 true scaffold_2: 1196313-1202751 Theobroma cacao
Thecc1EG006205 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1196313-1198312 Theobroma cacao
Thecc1EG006205 2.0kb downstream 2.0kb downstream 6439 true scaffold_2: 1198313-1204751 Theobroma cacao
Thecc1EG006205 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1202752-1204751 Theobroma cacao
Thecc1EG006205 5.0kb upstream 5.0kb upstream 9439 true scaffold_2: 1193313-1202751 Theobroma cacao
Thecc1EG006205 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1193313-1198312 Theobroma cacao
Thecc1EG006205 5.0kb downstream 5.0kb downstream 9439 true scaffold_2: 1198313-1207751 Theobroma cacao
Thecc1EG006205 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1202752-1207751 Theobroma cacao
Thecc1EG006205 10.0kb upstream 10.0kb upstream 14439 true scaffold_2: 1188313-1202751 Theobroma cacao
Thecc1EG006205 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1188313-1198312 Theobroma cacao
Thecc1EG006205 10.0kb downstream 10.0kb downstream 14439 true scaffold_2: 1198313-1212751 Theobroma cacao
Thecc1EG006205 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1202752-1212751 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836703 5264 Brassicales-Malvales View MSA
124322196 5266 SBM View MSA
124169099 5268 Malvidae View MSA
124071985 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain