Gene : Thecc1EG006389 T. cacao v1.1
Defline:  Maternal effect embryo arrest 9 (75%P) Genomic Order:  365
Name:  ? Thecc1EG006389 Secondary Identifier:  ? PAC:27462248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006389 0.5kb upstream 0.5kb upstream 1736 true scaffold_2: 2004752-2006487 Theobroma cacao
Thecc1EG006389 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2005988-2006487 Theobroma cacao
Thecc1EG006389 0.5kb downstream 0.5kb downstream 1736 true scaffold_2: 2004252-2005987 Theobroma cacao
Thecc1EG006389 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2004252-2004751 Theobroma cacao
Thecc1EG006389 1.0kb upstream 1.0kb upstream 2236 true scaffold_2: 2004752-2006987 Theobroma cacao
Thecc1EG006389 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2005988-2006987 Theobroma cacao
Thecc1EG006389 1.0kb downstream 1.0kb downstream 2236 true scaffold_2: 2003752-2005987 Theobroma cacao
Thecc1EG006389 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2003752-2004751 Theobroma cacao
Thecc1EG006389 2.0kb upstream 2.0kb upstream 3236 true scaffold_2: 2004752-2007987 Theobroma cacao
Thecc1EG006389 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2005988-2007987 Theobroma cacao
Thecc1EG006389 2.0kb downstream 2.0kb downstream 3236 true scaffold_2: 2002752-2005987 Theobroma cacao
Thecc1EG006389 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2002752-2004751 Theobroma cacao
Thecc1EG006389 5.0kb upstream 5.0kb upstream 6236 true scaffold_2: 2004752-2010987 Theobroma cacao
Thecc1EG006389 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2005988-2010987 Theobroma cacao
Thecc1EG006389 5.0kb downstream 5.0kb downstream 6236 true scaffold_2: 1999752-2005987 Theobroma cacao
Thecc1EG006389 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1999752-2004751 Theobroma cacao
Thecc1EG006389 10.0kb upstream 10.0kb upstream 11236 true scaffold_2: 2004752-2015987 Theobroma cacao
Thecc1EG006389 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2005988-2015987 Theobroma cacao
Thecc1EG006389 10.0kb downstream 10.0kb downstream 11236 true scaffold_2: 1994752-2005987 Theobroma cacao
Thecc1EG006389 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1994752-2004751 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831167 5264 Brassicales-Malvales View MSA
124337028 5266 SBM View MSA
124241420 5268 Malvidae View MSA
124066121 5270 Rosid View MSA
123737729 5271 Pentapetalae View MSA
122791218 5272 Eudicot View MSA
122045039 5273 Angiosperm View MSA
121310391 5274 Embryophyte View MSA
123347887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain